Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01792 ATGGTATGCCTGTTGGCGGCGGCGGGAGTGCAAGGTGAAGACCCGTACGTGTATTACACATGGAACGTGACGTACGGTACTATTGCTCCTCTGGGAGTGCCGCAGCAGGGTATTCTTATCAACGGCCAATTCCCTGGACCCGAAATCAACTGCACAAGCAACAACAACATTGTGGTGAATGTTTTTAACTGCCTTGACGAGCCAGTCCTTTTTACCTGGCACGGTATTCAACATAGGAAGAATTCTTGGCAAGAAGGTACTCCAGGAACCTCCTGCCCCATCGCTCCTGGGACCAACTACACCTACCACTTCCAAGTGAAGGATCAAATTGGAACTTTTTTCTACTATCCTTCAACAGCTTTACACAGGGCTGCTGGTGGTTTCGGTGGCCTTCGAATCTTCAGTCGTCTTTTGATTCCCGTTCCATATGCTGACCCCGAGGATGAGTACTGGGTTCTCATGGGTGACTGGTACACAAAGAGCCACACTATCCTTAGGAAGTTCTTGGACAGCGGTCGTTCTATTGGTAGGCCTGCTGGTGTGCACATCAATGGCAAAACAGCCAAGGGTGATGGCAGTGATGAACCCCTTTACACCATGAAGCCTGGCAAGACCTACAAGTATAGAATATGCAACGTTGGTCTTAAGGACGCCCTTAACTTCAGGATCCAAGGCCATCCCATCATGCTTGTGGAGACGGAAGGCTCCCACGTTGTCCAAAACACGTATGATTCTCTTGACGTTCATGTTGGTCAATGCTTTACTGTCCTTGTCACCGCCAACAAGGACCCGAAGGACTATTACATGGTTGCCTCCACACGCTTCACCAAGTACGATTACACCGCCAAGGCCATCATCCGCTACACTAACAGTGCAGCTCCTGCCTCACCGGAGCTCCCTCCTGCACCTGTTGGTTGGGCTTGGTCTCTGAATCAGTTCCGCTCCTTCCGTTGGAATCTCACCGCTAGTGCTGCAAGGCCTAATCCTCAGGGTTCTTACCATTATGGCCAGATCAACATCACTCGCACCATCAAGTTGGCCAACTCCGTAAGCAGAGTCCAAGGTCTTCGTTATGCCATCAATGCTGTCTCACACATTGATCCCGAAACTCCTCTCAAGCTCGCTGAGTACTACGGAGTTGCTGACAAGGTTTTCAAGTACAACACCATATCCGATGAGCCCCCCGTTGATCTAAACTCAATCATCAAGGTACCTAATGTCATCAATGCCACATTCCGCAACTTCATCGAGATTATCTTTGAGAACCACGGAAAAACCGTCCAATCATACAATTTGGATGGCTACTCATTTTTTGCAGTCGCCATAGAGCCAGGCAGATGGAGCCCATTGAAAAGGAAGAACTACAACCTTCTTGACGCCGTGAGCAGACACACCATTCAAGTCTTCCCCAAATCTTGGGCCGCCATCATGTTGACGTTCGACAATGCTGGAATGTGGAATCTGAGATCGGAGCATGCTGAGAATCGCTACTTGGGCCAACAACTCTACATTAGCGTTTTGTCCCCTGAACGTTCCCTCAGGGATGAGTACAACCTCCCAGATTCCCAGCTTCTTTGCGGCATCGTCAAGGATTTGCCCAGGCCACCGCCATATTCCATGTAG 1623 0.4978 MVCLLAAAGVQGEDPYVYYTWNVTYGTIAPLGVPQQGILINGQFPGPEINCTSNNNIVVNVFNCLDEPVLFTWHGIQHRKNSWQEGTPGTSCPIAPGTNYTYHFQVKDQIGTFFYYPSTALHRAAGGFGGLRIFSRLLIPVPYADPEDEYWVLMGDWYTKSHTILRKFLDSGRSIGRPAGVHINGKTAKGDGSDEPLYTMKPGKTYKYRICNVGLKDALNFRIQGHPIMLVETEGSHVVQNTYDSLDVHVGQCFTVLVTANKDPKDYYMVASTRFTKYDYTAKAIIRYTNSAAPASPELPPAPVGWAWSLNQFRSFRWNLTASAARPNPQGSYHYGQINITRTIKLANSVSRVQGLRYAINAVSHIDPETPLKLAEYYGVADKVFKYNTISDEPPVDLNSIIKVPNVINATFRNFIEIIFENHGKTVQSYNLDGYSFFAVAIEPGRWSPLKRKNYNLLDAVSRHTIQVFPKSWAAIMLTFDNAGMWNLRSEHAENRYLGQQLYISVLSPERSLRDEYNLPDSQLLCGIVKDLPRPPPYSM 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01792 540 Gene3D - 146 326 IPR008972 -
Spst1g01792 540 Gene3D - 336 531 IPR008972 -
Spst1g01792 540 PANTHER MULTI-COPPER OXIDASE 35 502 IPR045087 -
Spst1g01792 540 Pfam Multicopper oxidase 386 509 IPR011706 GO:0005507|GO:0016491
Spst1g01792 540 Pfam Multicopper oxidase 22 135 IPR011707 GO:0005507
Spst1g01792 540 CDD CuRO_2_AAO_like_1 148 288 IPR034271 -
Spst1g01792 540 Gene3D - 7 134 IPR008972 -
Spst1g01792 540 SUPERFAMILY Cupredoxins 338 526 IPR008972 -
Spst1g01792 540 Pfam Multicopper oxidase 149 290 IPR001117 -
Spst1g01792 540 SUPERFAMILY Cupredoxins 145 327 IPR008972 -
Spst1g01792 540 SUPERFAMILY Cupredoxins 13 162 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01792 Spst-Chr1 25467787 25469512 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01792 K00423 - gmx:100812197 923.694