Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01788 ATGCAAACTCTCTGGCTGAGGCTGAGACTTTTCAATTCCGATACCAAGTCTCTTGTTAGACTTTCATCCTATCTATATTCTTCTTCTTGTTCTCCGCCACCGTTGAATCTTACCTCACTATCATCACCGCTTCCTGCTTCCTCTACCTATACCAACTTGTTCACCTCCCCTTGGTCTTCCTCTCAATGTCGGGGAATCAAAGTATCTGGTTCTGATATTAGAGTCGGAAATATCATTGGAAAACAAGGTTTCTTTGCTTTGGGGTTATTGAATTTTACTCAGTGGATTCAAATTGACATGGCGCATTTACGAGGTAAGGAATGTGAAGTAGTAATGGTCATTGTGTCTTGGAAAGCTGGTTTTTGCACATTTTCTGCACTCTCTTCAAGATATATCTTAACACACAGAACCATCTCCTTGTTGCACAATACAGTGGAACTGCGTGACATTGGCCAGGGAAACAAGGTAACACAAAGAATGGGTACCGATGATGATATTGAAAGGGTCTATGTTCAAGAAAAGACTTTCATGTTTATGTGCATGGATAGTGATGGAACGGTAGTATTGATGGACCCTGACACACTGGATCAAATCGAAGTTTCCAAGGACTTGTTCAACAAGGACTTTGTATATCTACGAGATAAAATGAAAGTTAAGGTACAATTTTATGATGACAAACCTTTATCCGCTTCAGTTCCAAAACGTGTAACATGTATTGTCAAGGAAGCCATTGCAGCCACCCCAAGGTATGTGCTTAAAGAATATTCTTTATATTCATATTGTCTTACATAA 792 0.3952 MQTLWLRLRLFNSDTKSLVRLSSYLYSSSCSPPPLNLTSLSSPLPASSTYTNLFTSPWSSSQCRGIKVSGSDIRVGNIIGKQGFFALGLLNFTQWIQIDMAHLRGKECEVVMVIVSWKAGFCTFSALSSRYILTHRTISLLHNTVELRDIGQGNKVTQRMGTDDDIERVYVQEKTFMFMCMDSDGTVVLMDPDTLDQIEVSKDLFNKDFVYLRDKMKVKVQFYDDKPLSASVPKRVTCIVKEAIAATPRYVLKEYSLYSYCLT 263
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01788 263 SMART EFP_2 173 228 IPR001059 GO:0003746|GO:0006414
Spst1g01788 263 SUPERFAMILY Nucleic acid-binding proteins 172 233 IPR012340 -
Spst1g01788 263 PANTHER ELONGATION FACTOR P 37 83 IPR020599 -
Spst1g01788 263 Pfam Elongation factor P (EF-P) OB domain 184 228 IPR001059 GO:0003746|GO:0006414
Spst1g01788 263 FunFam Elongation factor P 170 234 - -
Spst1g01788 263 Gene3D - 170 233 IPR012340 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Spst1g01788 Spst-Chr1 23874840 23887397 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01788 - - gmx:100805422 253.062