Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01579 ATGATGCCGATGAAGAACAGCCCTTTGCACAGAACCCGTTTGGGCATGGCTGAGCCTGGTTATTACAGAGCACCCTCTAAAGTGGTTTCCATCCCGGTTCACTTTGTGGGTTCAGAGCACACCAGAACCGATTCTGCCATAAAGATTCAGAGGATATTGAGAGGGTTCCTTGTGAGGAACGTGATGAAGAAGATCGCCGCCATGGGGGTGGAGTTGGAGCGGATCGAGAGTGAGATTCAAGTGGAAGTGTTGAGGAGGGACCAACGAGAGAGGGTGAGGGTGACGGAGACCATCATGAACTTGCTTCTTAGGCTGGATTCTGTTCGGGTATTGCACTACTCTGGCCTCAGGGAGTGCAGAAAGTCTGTCATAAGAAAGGCTATTGCTCTTCAAGAAATGCTTGATGACATGGCAGTTCCTAATTCTGAGGGTGTGAAGGTGGAGGCTACAGGGAATGAGGAGGAGGAGAAAAAAGAGAAGGAGGGTGAATGTGTGGTGGGAGAAGATAATTGTTTGGTGAAGGAAGAGCAAGGTAATGGAATGGAAAATTTGAGGAATGAGGGGGTAGGAAAAGAGAGTGGGGGGATGGAAGAAGAAAGTATTGGGTTAGAAACAAGTTTGGTTGAGGGAAAAGAGAGTGAAATTACATGTGAGGAGCAAGAGGAGGGTGAGGAAATTGAAGCTTTAAGGATTAAGGAGGTGGAAGAGAAGGAGGATGGTGAGGTAGGACAGGGTTTGGTTGGGGAGAATTGTTTGTTGAAAGAGGAGGAAGGGAATTGTGAAAGAGAGGAAGGAAACGAGAAGAGGGAGTTGTTGTTGGAGAAGATTCTGGAAGACAACAAGAAGATGATGGAGATGATGGCGCAGCTTTTTCAGAGGAATGAGATACAGACTACACTTCATACCTCTCTCTCACAGAGGGTGGAGCAGCTTGAGAGAGCCTTTGTTTGTGAGAAACTGAGGAGGAAGAAAAAGTGCAAGTCTGATCGAAAACATAAACAAAATCATCCTAGAAATGACTTCATCTGA 1029 0.4655 MMPMKNSPLHRTRLGMAEPGYYRAPSKVVSIPVHFVGSEHTRTDSAIKIQRILRGFLVRNVMKKIAAMGVELERIESEIQVEVLRRDQRERVRVTETIMNLLLRLDSVRVLHYSGLRECRKSVIRKAIALQEMLDDMAVPNSEGVKVEATGNEEEEKKEKEGECVVGEDNCLVKEEQGNGMENLRNEGVGKESGGMEEESIGLETSLVEGKESEITCEEQEEGEEIEALRIKEVEEKEDGEVGQGLVGENCLLKEEEGNCEREEGNEKRELLLEKILEDNKKMMEMMAQLFQRNEIQTTLHTSLSQRVEQLERAFVCEKLRRKKKCKSDRKHKQNHPRNDFI 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01579 342 Gene3D BAG domain 46 142 IPR036533 GO:0051087
Spst1g01579 342 Pfam IQ calmodulin-binding motif 43 60 IPR000048 GO:0005515
Spst1g01579 342 Coils Coil 273 293 - -
Spst1g01579 342 ProSiteProfiles IQ motif profile. 42 71 IPR000048 GO:0005515
Spst1g01579 342 Pfam BAG domain 71 136 IPR003103 GO:0051087
Spst1g01579 342 ProSiteProfiles BAG domain profile. 61 138 IPR003103 GO:0051087
Spst1g01579 342 PANTHER BAG DOMAIN CONTAINING PROTEIN, EXPRESSED 25 330 IPR040400 -
Spst1g01579 342 SMART BAG_1 61 138 IPR003103 GO:0051087
Spst1g01579 342 SUPERFAMILY BAG domain 60 136 IPR036533 GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01579 Spst-Chr1 19654142 19655170 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01579 - - gmx:121173982 367.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01579 1 19654142 19655170 Spst1g01579 1 19654142 19655170 ECH