Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01578 ATGGCGTTGAGACTGAGTACTGTGGTTTCAGGTGTTGGTCCGAGGCATTCGGGGAAACCTAGGTTGAAGTTGAGGTTCGGAGTTAGGAGTGGTTGTTGTGCTGCAGTTACAAATATGGCCTTCACTGAAACCCCTTCAACCTTCAAGGTCTTTGATTCCCATCTCCACGTGTGGGCTTCACCTCAAGAGGCTGGTAAATTCCCTTATTTTCCTGGACAAGAACCCACTTTACCAGGAAATGCCGACTTTTTGCTCCAGTGTATGGAGGAGGCAGGAGTAGATGGTGCACTCATTGTGCAACCAATTAATCATAAATTTGATCATAATTATGTCACAAGCGTTTTGAAGAAATATCCGATCAAATTTGTTGGTTGTTGCCTTGCTAATCCAGCTGATGATGGAAGTGGGCTTAAGCAGTTTGAAGATCTTGTTTTGAAGGATGGTTATCGAGCTATTCGATTCAATCCTTATTTGTGGCCAACTGGAGAAAAGATGACAAATAAAGTTGGAAAGGCTATTTTCCAAAGGGCTGGAGAACTCAATGTGCCAGTGGGCTTCATGTGTATGAAGGGGCTTGGTCTGCATATTTCTGAAATTGAGCAACTATGCACAGAATTTCCATCAACAGTTGTATTGCTTGATCACTTGGCCTTTTGCAAACCGCCAATAAATGATGAGGAAGGTCTTGTCTTTACTCAACTTTTAAATCTGTCTAGATTCCCACAAGTACATGTGAAATTTAGTGCCCTTTTCAGAGTGTCAAGAGGACAGTTTCCTTATCTGGATTTGTCTCCTCTCTTATCTCAAGTTGTCTCTCACTTTGGTGCTAACCGTGTAATGTGGGGCAGTGATTTTCCATTTGTTGTTGCTGAATGTGGTTACAAAGGAGCCAAAGAAGCAGTGCATAATATTGGCAATGAGATCTCTTTGCCTTTTTCAGATTTAGAGTGGATCATGGGAAGGACAGCTACACAACTCTTCCAAAACCAATTGACTCCACTCAAGAACTGA 1011 0.4233 MALRLSTVVSGVGPRHSGKPRLKLRFGVRSGCCAAVTNMAFTETPSTFKVFDSHLHVWASPQEAGKFPYFPGQEPTLPGNADFLLQCMEEAGVDGALIVQPINHKFDHNYVTSVLKKYPIKFVGCCLANPADDGSGLKQFEDLVLKDGYRAIRFNPYLWPTGEKMTNKVGKAIFQRAGELNVPVGFMCMKGLGLHISEIEQLCTEFPSTVVLLDHLAFCKPPINDEEGLVFTQLLNLSRFPQVHVKFSALFRVSRGQFPYLDLSPLLSQVVSHFGANRVMWGSDFPFVVAECGYKGAKEAVHNIGNEISLPFSDLEWIMGRTATQLFQNQLTPLKN 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01578 336 PANTHER 2-AMINO-3-CARBOXYLMUCONATE-6-SEMIALDEHYDE DECARBOXYLASE 49 330 IPR032465 GO:0016831
Spst1g01578 336 FunFam Catalytic/ hydrolase 39 329 - -
Spst1g01578 336 Pfam Amidohydrolase 52 327 IPR006680 GO:0016787
Spst1g01578 336 Gene3D - 41 331 - -
Spst1g01578 336 SUPERFAMILY Metallo-dependent hydrolases 50 327 IPR032466 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01578 - - pvu:PHAVU_008G016700g 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01578 1 19646737 19651307 Spst1g01578 1 19646737 19651307 ECH