Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01573 ATGGATTCTTCTACTTTTTATCCTTCGATCTCTCACGTCAGAGTCTCCGCGAATTCCTTCCTCTCCCAATACGAACCACTTGCTCTGCTTCTCCTTCCACTCCTCTCTGTTCTTCTCGCTCACTCGCTTCACTCCATCTTCCGCCACCTCTCCGAGAACGGACTCAAAGCCACGCTACTAGGGTTTCTCTTGAACTCTGTCAAATTGGTCCCTGGCGTGAAGGGGTACATAGATGCCGAAAAACAGAAGGTTGTGGATAAGTTGCAATCTGACAGCAAATCTAGAAGAGATGGTTGGAATACTGAGTTGCCAAGCATAGGATTAGGGACATCTGTCCTCGAGAAAATGAGAGAGGAAAAAATAAACGATCCACTCTGGCAAGGCAAATGCTCCGGTACAGTGTACATTGGAGGAAGTGAATCTGATGGACATTTTTCTGTGATAAACGAGGCATGTTCAATGTTTGCTCATACCAATCCCCTGCATTTGGATGTATTCAAGAGTGTTACACGCTTTGAGGCAGAAGTGGTTGCAATGACAGCGGCACTTCTTGGAAGTAAGGAAAATAGTTCTGGAGGACAAATATGTGGCAACATGACATCAGGCGGGACTGAAAGTATATTATTAGCTGTCAAATCCTCCCGTGACTATATGAAATCTAAGAAAGGAATTACAAGACCTGAAATGATTATTCCTGTGTCTGGACACTCAGCATATGACAAGGCTGCAAAGTATTTAAATATCAAACTATGGCGTGTACCAGTTAACAAGAATTTTCAAGCAGATGTGAGAGCGATTCGACGTCATATTAACAAAAATACCATCTTGATTGTTGGATCTGCGCCAGGGTTTCCTCATGGAATAATTGACCCCATTGAAGATCTTGGTCATCTGGCATCAAGCTTTGGTATTTGTTTCCATGTGGACCTTTGCCTTGGTGGCTTTGTATTACCATTTGCTCGTGAGCTTGGGTACCCTATTCCACCTTTTGATTTTTCTGTTAAAGGGGTTTCTTCAATTTCAGCAGATGTACATAAATACGGTTTAGCTCCCAAAGGAACAAGTGTAGTTCTTTATAGAAACCATGAAATCAGAAAGGCTATACATCCAAATGTCTTAGTTCAAGAGTCCTCTATCTCTTTCTCTTCCTTGGGAAATCATGAAGAGTTGGTAGATGAAATATTCTTGCATTTCTTCATAGGGATAGTAAGCATCAATTTGTTGCTGTGTCAAATTGTCAATGTCACAGTTACTGAGTGGTCTGGTGGGTTGTATGTGTCTCCAACCATAGCTGGAAGCAGGCCTGGAAGTCTTATTGCTGGTGCGTGGGCAGCAATGATTTCTCAAGGGAAAGAAGGTTACTTGAAAAATACAAAAGCAATTATGGAGGGGTCAAGAAGAATACAGAAAGGCATACAGGAGATTGCTGAGTTGTTTATTGTTGGAAAACCCGACATGACCATCGTGGCTTTTGGATCTGATGTTCTAGATATATTTGAAGTGAATGATATTATGTCATCCAAAGGGTGGCATTTGAATGCATTACAGAGACCCAACAGCATCCATATCTGTGTTACACTGCAACATGTACCAATTATTGAAGACTTTCTCAATGATTTGAAGGAGTCTGTGAAAACTGTGAAAGAAAATCCAGGTCCAATAAGTGGAGGCCTAGCACCTATATATGGCGCCGCAGGGAAGATGCCAGATAGAGGCACGGTCCAGGAATTGCTGGTAGATTATATGGACGGTACCTGCTAA 1761 0.4225 MDSSTFYPSISHVRVSANSFLSQYEPLALLLLPLLSVLLAHSLHSIFRHLSENGLKATLLGFLLNSVKLVPGVKGYIDAEKQKVVDKLQSDSKSRRDGWNTELPSIGLGTSVLEKMREEKINDPLWQGKCSGTVYIGGSESDGHFSVINEACSMFAHTNPLHLDVFKSVTRFEAEVVAMTAALLGSKENSSGGQICGNMTSGGTESILLAVKSSRDYMKSKKGITRPEMIIPVSGHSAYDKAAKYLNIKLWRVPVNKNFQADVRAIRRHINKNTILIVGSAPGFPHGIIDPIEDLGHLASSFGICFHVDLCLGGFVLPFARELGYPIPPFDFSVKGVSSISADVHKYGLAPKGTSVVLYRNHEIRKAIHPNVLVQESSISFSSLGNHEELVDEIFLHFFIGIVSINLLLCQIVNVTVTEWSGGLYVSPTIAGSRPGSLIAGAWAAMISQGKEGYLKNTKAIMEGSRRIQKGIQEIAELFIVGKPDMTIVAFGSDVLDIFEVNDIMSSKGWHLNALQRPNSIHICVTLQHVPIIEDFLNDLKESVKTVKENPGPISGGLAPIYGAAGKMPDRGTVQELLVDYMDGTC 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01573 586 PANTHER - 39 586 - -
Spst1g01573 586 Gene3D Aspartate Aminotransferase, domain 1 451 540 IPR015422 GO:0003824
Spst1g01573 586 Gene3D - 541 585 - -
Spst1g01573 586 FunFam sphingosine-1-phosphate lyase 1 141 378 - -
Spst1g01573 586 Pfam Pyridoxal-dependent decarboxylase conserved domain 167 364 IPR002129 GO:0016830|GO:0019752|GO:0030170
Spst1g01573 586 FunFam Sphingosine-1-phosphate lyase 1 437 549 - -
Spst1g01573 586 FunFam Sphingosine-1-phosphate lyase 1 546 585 - -
Spst1g01573 586 Gene3D - 173 450 IPR015421 GO:0003824
Spst1g01573 586 SUPERFAMILY PLP-dependent transferases 125 549 IPR015424 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01573 157 544 Calmodulin-binding Proteins AT5G17330 23.961 1.09e-18 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01573 K01634 - gmx:100794395 945.266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01573 1 19591073 19597162 Spst1g01573 1 19591073 19597162 ECH