Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01554 ATGACCATGGTTCCTTCTCAAAACGGGAAACAACAGAACATTAATAGGAGTGGTGATTTTGTTATTTACGGTAACACGACAACGAGTAGTGCTATGAACCAGGTTATTGAAGTTGAAGGAGGCTACAATTGCTTATTAGGATCTGATTTTGTGGTGAGGAGGCACGTCATGGCTGATGCTGAAGAATCATCCAGACACAACAACAACAACAACAACAACGAGGAAGCTGAACCCGGTGGCTGCGGTTCAACCTCAAAGGAAGAAGAAGTAGAAGGAGCAAAAAACAACATCAACAACAATAACTGGCTTCAATTAAGCATAGGTTTGACAAGCACAAAGCAAGACAGTGATCGAACCGTTCCAACAACAACCGGTTCAGGGCTTGTGGAGTTAGATTTGCTACCCTCACGGCGGAGCTTCGATCAGCCGCCGGCGTTTTTTCCGGTGGTGGCTTCCGGGAGAGGAGGAGGGCCTAGTTTCGGTGGTTCTTCTTCTTTGCTTTTTGAGCATCAAACGACGTCGTCTTCTTCCATGTCCATGTCTACGGCTAGTGGTCCAATTACCTCAACCTTTGGTCATCAGGAGATGATGAACTGGGCATTTGGTCCACTACTTACTCATTCTATGCCTATTATGCCCTCTTCTTCCTCTTTCACTCCACTTCCTCCTCCTTCTTCTTCTTCTTCCTCGTCACAATCTTGTTACTCCCCTTTGAGGCCTCCCTTAGGATCTTACTTTCCCACACCCTTTCATCACTTCCCTTCTTCTTCTTCTTCTTCTGGGTTTGATCAATATGACGTGGCTGGGGCTGGACCAAGCTCCGATGTCACCGTTCGAGTTGTCGATCCTCCTCGAAGACCTCATTCTGGAATATGGTTTATGTTGCAAGCTTCTCAAAATCAAGACGGAAGGATGACAGTTCGGTTGCTATTGAAGTATCTGGTTAGCAAACTTAGACTGGAAAGCGAATCAGAGGTAATGCATGCACTGTGCGTTTGTATTTGCAATGCAACTTTTGTGTTTGACATCATAAATGTATTTGTTTATGTTGTGGTGGTGGATAAATCACTGTGTAGCCACGTGATGATAGAGATAAGATGCAGAGGGCAGCAACTTTTACCTTTCTTGACGTTGCAGCATGTGAGGGATAACATTTGGAGCCCCAGAGACAGCACAAGAGCATTGCTTTCAGATTCCTCAACCTCGGATCATGTCATGGTGCTCCATTATGGTAGAACCACTCCTTAA 1248 0.4535 MTMVPSQNGKQQNINRSGDFVIYGNTTTSSAMNQVIEVEGGYNCLLGSDFVVRRHVMADAEESSRHNNNNNNNEEAEPGGCGSTSKEEEVEGAKNNINNNNWLQLSIGLTSTKQDSDRTVPTTTGSGLVELDLLPSRRSFDQPPAFFPVVASGRGGGPSFGGSSSLLFEHQTTSSSSMSMSTASGPITSTFGHQEMMNWAFGPLLTHSMPIMPSSSSFTPLPPPSSSSSSSQSCYSPLRPPLGSYFPTPFHHFPSSSSSSGFDQYDVAGAGPSSDVTVRVVDPPRRPHSGIWFMLQASQNQDGRMTVRLLLKYLVSKLRLESESEVMHALCVCICNATFVFDIINVFVYVVVVDKSLCSHVMIEIRCRGQQLLPFLTLQHVRDNIWSPRDSTRALLSDSSTSDHVMVLHYGRTTP 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01554 415 PANTHER RING FINGER PROTEIN 1 413 IPR044171 GO:0007275
Spst1g01554 415 MobiDBLite consensus disorder prediction 214 235 - -
Spst1g01554 415 MobiDBLite consensus disorder prediction 63 79 - -
Spst1g01554 415 MobiDBLite consensus disorder prediction 61 97 - -
Spst1g01554 415 Coils Coil 57 77 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01554 - - gmx:102664960 434.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01554 1 19322017 19329771 Spst1g01554 1 19322017 19329771 ECH