Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01360 ATGGTGGTAGAATGGGAAGAAGCATACATGGACTACAACTCTCTCAAAGCCACTCTGAAACACATGTCAAGGTTTAGGGAGTTAAACGAGTCGGCAGCAATGGCATTCACCCCGAAAGGGTCATTGAAGAGAAGGTTAACCCTCTATAGAGCCTTTAGTGGTCTTACTGGTAGACAAAGAGAGTCTCCTAGGAAGAGTGAGGATGAAGTTATACTTGTTCGAGCTGAGGAGGGTGAAGGTTCAGAAGGGTTGTACCAGACCATGTTCCTCAAGCCTTCTGAAGAAGGGGCAGAGCAAGATCTTGTATTTTTCAAGAAACTCGATCGTGAGTTTAACAAGGTCAATAACTTCTACAAGAAAATGGTGAAGAAGATGGTTGAGGAGGCAGAGGAGTTAAGTAAGCAAATGAATGCTTTGATTGTTCTCAGAATCAAGGTGGATAAGGTGAGGTTCAGCAATGTTGCTAGCAATGGGAGCTCAAATTCAATTTCCCTGAATGGTCATATAAATGATGCCAGACCTGGTCACTCACGTGTGCACATGGATGTGATTCATGAAATTGAATTGAGCAATGAAAGGCATTTGGAAAATGAAAGTGGAAACTGCGAGGTACAAGCCACTTCTAAGACTTCGGAAGAAGGCTTTAGACCAGCTTCGATGGAGATCCTTGATCGTGTGAAGATCAACATGACCACAGCAGATTCTCCTATATCAACCATAAAAGGGCTTCTCCCGAGTTCAAAACCTAACCAATCATTTAGCAGGAAAGAGCTCACGAAAGCGGAGGAACAAATAAGCATAGCCTTAAAGGAATTCTATCACAAGCTTCGACTTCTAAAAAGCTATAGTTTCTTAAACTTGTTGGCATTCTCCAAAATCATGAAGAAATATGACAAGGTCAGTTCAAGGAATGCATCAAAGGATTATTTAAAGATGGTGGACAGTTCATATGTTGGCAGCTCAGATGAGGTTAATAGGCTCATGGAAAGGGTTGAACATGCCTTCATTAAGCACTTTGCAAATGGGAATCACAGGAAAGGAATGAACACATTGAGACCAACTATTAAGAAGGAGAGACATAGGATCACATTCTTACTGGGGTTATTTACTGGATGCTCAATTGCCCTCATTGTGGCTCTTATTATACTCATACATGCAAGAAATATTTTATATAGCGAGGGACGTACTAGATATATGGACAACATATTTCCTCTTTATAGCCTCTTTGGATACATAGTCTTGCATATGATCATGTACTCTGCAAATGTATACTTCTGGAGGCGTTATAAAATCAACTACCCCTTTATATTTGGCTTCCAGAAAGGAACAGAATTGGGATATAGAGAAGTCTTTCTTCTTAGCTCCGGCCTTGCAGTACTCTCATTGGCTGCAGTCCTGTCAAACTTGGATATGGAGATGGATCAGAGAACAAAAAGTTTCTCAGCATTCACAGAATTAGTCCCTTTAGGCCTTGTCATTGTTCTGCTTCTCATTACATTTTGTCCCTTCAACATCATTTATAAATCCAGTCGCTTGTTCCTTATTCGATGTGCATTTCATTGTGTTTGTGCTCCTCTTTACAAGATCAATCTCCCAGACAATTTCTTGGCAGACCAGCTTACCAGCCAGGTACAAGCCTACAGAAGTTTGGAATTCTATGTCTGCTACTATTTCTGGGGAAACTTCAAGTCCAGGTCAAACAAGTGCCTCGAAAGTGATGTCTATAGAGCATTTTATTTAATTGTAGCTATTATTCCATTCTGGATCCGTTGTCTCCAGTGCTTTCGACGCTTACTTGAAGATAGAGATATAATGCACGGTCTCAATGGGCTAAAGTACATCTCAACAATAGTAGCACTTGTCATGAGGACTACCAATGAGTTCCATAAAGGAATGGTTTGGCAAATTCTAGCTGCAACTTCTTCAAGCCTTGCAACCATTGTTAATACATATTGGGATGTTGTCATAGACTGGGGTTTGCTTAGAAGGAATTCAAAAAATCCATGGTTGAGAGAAAAACTCTCCATACCAAACAGAAGTGTATATTTTGCTGCTATGGTGTTGAATGTTGTACTGCGACTTGCATGGATGCAATCTGTTTTAGGCATCAGGGAAGCTCCTTTCCTGCATAGAACTGCTTTGACTGCTCTTGTAGCTTGCTTGGAGATCCTTCGCCGTGGCATTTGGAATTTTTTCAGGTTGGAGAATGAGCACTTGAACAATGTTGGCAATTATCGAGCATTCAAATCAGTACCACTACCTTTTAGTTATGAAGATGAGGAAGAGATTACTGTCATATGA 2301 0.4068 MVVEWEEAYMDYNSLKATLKHMSRFRELNESAAMAFTPKGSLKRRLTLYRAFSGLTGRQRESPRKSEDEVILVRAEEGEGSEGLYQTMFLKPSEEGAEQDLVFFKKLDREFNKVNNFYKKMVKKMVEEAEELSKQMNALIVLRIKVDKVRFSNVASNGSSNSISLNGHINDARPGHSRVHMDVIHEIELSNERHLENESGNCEVQATSKTSEEGFRPASMEILDRVKINMTTADSPISTIKGLLPSSKPNQSFSRKELTKAEEQISIALKEFYHKLRLLKSYSFLNLLAFSKIMKKYDKVSSRNASKDYLKMVDSSYVGSSDEVNRLMERVEHAFIKHFANGNHRKGMNTLRPTIKKERHRITFLLGLFTGCSIALIVALIILIHARNILYSEGRTRYMDNIFPLYSLFGYIVLHMIMYSANVYFWRRYKINYPFIFGFQKGTELGYREVFLLSSGLAVLSLAAVLSNLDMEMDQRTKSFSAFTELVPLGLVIVLLLITFCPFNIIYKSSRLFLIRCAFHCVCAPLYKINLPDNFLADQLTSQVQAYRSLEFYVCYYFWGNFKSRSNKCLESDVYRAFYLIVAIIPFWIRCLQCFRRLLEDRDIMHGLNGLKYISTIVALVMRTTNEFHKGMVWQILAATSSSLATIVNTYWDVVIDWGLLRRNSKNPWLREKLSIPNRSVYFAAMVLNVVLRLAWMQSVLGIREAPFLHRTALTALVACLEILRRGIWNFFRLENEHLNNVGNYRAFKSVPLPFSYEDEEEITVI 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01360 766 ProSiteProfiles SPX domain profile. 1 311 IPR004331 -
Spst1g01360 766 Pfam EXS family 403 739 IPR004342 GO:0016020
Spst1g01360 766 CDD SPX_PHO1_like 1 307 IPR034092 -
Spst1g01360 766 Pfam SPX domain 1 313 IPR004331 -
Spst1g01360 766 PANTHER XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED 1 759 - -
Spst1g01360 766 ProSiteProfiles EXS domain profile. 570 765 IPR004342 GO:0016020
Spst1g01360 766 Coils Coil 115 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01360 Spst-Chr1 17067529 17072392 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01360 - - gmx:100795104 1301.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01360 1 17067529 17072392 Spst1g01360 1 17067529 17072392 ECH