Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01318 ATGGATAATTTTACGGAGTATTTTTCGGAATTTTTCTCCAGGCTTTTGAATACTCTGTTTGGGGTATTCACCAATGTCATCATGAGGTATTGGATCTTCAATTTTAGAATATTCTGTTGTTCTGATTCTTCAAAAGCAATGAATGATTTTTCTAAAGAAATGAATCCGCTTTGTTCTTCTCAGTTTTCACCTGACAAAGAGCAAGCTGCGTCAATTCATTCTGATCCTGAAAGTTTTGTGTCTCTAGCCGATACTCTCTCATGTGAAAGTGATCAAAATGATTCCAATGATTGCCAGGGAGGAGCAAAGTCCACGGAAAAATGTTGTTCTGAAACTCTTCGTGACAGTGAGACTTTTGGGCCTGAAGAAGAGGAAACGACGAAGTTAGTTTTCAAATTTGAATATCAAAAGTGGAATTGCAATTATAATGAAGAATTCAGAGGAGCGTATGGTGAAAGTAGTGATTTTGTGAAGGGGAGTGATGCTGTTTCTGCCAGCACAACCAGTAAGTATGAGTTCATGTCAGGCAAGAGTTTTAGTCACTTCTTGGATGAACCTCGGGCTGGAAATTTCACTGTCAAAGAATGTTTTGTTCATTCAAACGATGCTTTTAAATCAGGAAATAATGTTAGCAATGATTTTGAGTTCTTGTCAAGTAGGAAATTTTTGCCAGAAAAATGTGAAGAAGGGGTTAGTGAAGAAAATCTTGACAATTCCACAGTTAATATGTTCAAAGCTGAACATCCCGTCGAGCCAATTGTTCACAATGTTCTGCCTGAAGATGATTTTATTTGTTCAAGTTCGGACGCAGATTCTATTATCAGTTCTTTGGGGGAGGGATTTTTGTCAGAAGCAGATTTTGGAAAAACTTTGGAGTATGAGACATTGGGAATCAATGCAGAAGAAAATGCAGTTCAAACAGAAGAGAATTTGGAATTTGGGGATGAGAGAAGCTATGAGAATTTCGATGTTGGATATGAGCCTGATGATTTTACTGAAGAGGATGAAGATATAATGGATGAACTTGGAAAATTGGAAGAAGAATGTAGGCTAGAGGAATCTTCAGGAAAAAGTTTCGAAAATAAACATAGCATCAATTCCAAGCCTGAACAGTCTATGAAGCCTATTTCACAAACTTTAACAACTATTGATCTTGAGGATTCCAACCGGTTTGACACACTGTGGGAACATCAAGATTTGATAGAACAGTTGAAGATGGAATTGAAGAAGGTCAGAGCCACTGGCCTACCTACCATCCTTGAGGATTCTGAGTCTCCAAGGATAATGGAAGACTTAAAGCCATGGAAAATTGATGAAAAATTACAGCATGGTAGCACTACGAATGAGCTTCCAAAATTCTACAGGAGTTATAGAGAACGAATGCGAAAATTCGATATCTTGAATTACCAAAAGATGTATGCAATAGGTGTTTTGCAGTCAAAGGACCCACTCCAGTCATTTTCAACCCGTAAGAACCCTTCACCGGCATTCACAAACATTCTTCCACGCGGCTTTCGCCTTTCTAGACGAAAACAAACAGAAGCTGACCCAATGAAGAAGTTCATGAGAGAATTATACAGTGACTTGGAAATGGTGTATGTGGGGCAGTTGTGCCTTTCTTGGGAATTCCTTCAATGGGAATATGAGAAGGCCTTGAAGCTATGGGAATCTGACCAATACGGGTTACTAAGATTCAATGAAGTAGCAGGGGAGTTTCAACAATTCCAAGTGCTTCTCCAAAGGTTTATAGAGAACGAACCTTTCCTCCATGGTCCACGGGTTGAAAACTATGCCAGGAATCGTTGTGCAATGCGCAATCTTCTGCAAGTTCCAGTAATAAGAGAAGACAACGCCAAGGAAAAAAGGAAATTCAGTAAAAGAGAGTCAGATAAAGACGCAATCACAAGTGACATGCTAGTGGAGATTTTGGAAGAATCCATCAGAACAATTTGGCGTTTTATAAGAGCTGATAAAGATGCATCTGGCTTAGCTCTTAAAGGTCCAAGAGAAAATCGAGTAGAGCTCCAAGACCCTTCAAATTCAGAGCTTTTGGATGAGATTCGAACAGATCTTCAAAAGAAGGAAAAGAGATTGAGAGAGCTTTTGAGGAGTGAAAGCTGCATACTGAAGAAGTTCAAAAAGCATCACGAAGAAGGGGCAGATCAAGTGCTTTACTTTTTCTCTCAAGTGGACATGAAATTGGTTTTGAGAATTTTGAACATGTCAAGGATAACGACGGATCAACTAGCGTGGTGTCGTAGTAAACTAAACAAGATCAATTTTGTAAACCGAAGGATACACGTAGAACCATCATTTTTACTTTTTCCTACTTCATAG 2337 0.3885 MDNFTEYFSEFFSRLLNTLFGVFTNVIMRYWIFNFRIFCCSDSSKAMNDFSKEMNPLCSSQFSPDKEQAASIHSDPESFVSLADTLSCESDQNDSNDCQGGAKSTEKCCSETLRDSETFGPEEEETTKLVFKFEYQKWNCNYNEEFRGAYGESSDFVKGSDAVSASTTSKYEFMSGKSFSHFLDEPRAGNFTVKECFVHSNDAFKSGNNVSNDFEFLSSRKFLPEKCEEGVSEENLDNSTVNMFKAEHPVEPIVHNVLPEDDFICSSSDADSIISSLGEGFLSEADFGKTLEYETLGINAEENAVQTEENLEFGDERSYENFDVGYEPDDFTEEDEDIMDELGKLEEECRLEESSGKSFENKHSINSKPEQSMKPISQTLTTIDLEDSNRFDTLWEHQDLIEQLKMELKKVRATGLPTILEDSESPRIMEDLKPWKIDEKLQHGSTTNELPKFYRSYRERMRKFDILNYQKMYAIGVLQSKDPLQSFSTRKNPSPAFTNILPRGFRLSRRKQTEADPMKKFMRELYSDLEMVYVGQLCLSWEFLQWEYEKALKLWESDQYGLLRFNEVAGEFQQFQVLLQRFIENEPFLHGPRVENYARNRCAMRNLLQVPVIREDNAKEKRKFSKRESDKDAITSDMLVEILEESIRTIWRFIRADKDASGLALKGPRENRVELQDPSNSELLDEIRTDLQKKEKRLRELLRSESCILKKFKKHHEEGADQVLYFFSQVDMKLVLRILNMSRITTDQLAWCRSKLNKINFVNRRIHVEPSFLLFPTS 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01318 778 Coils Coil 684 704 - -
Spst1g01318 778 PANTHER OS09G0413600 PROTEIN 5 776 - -
Spst1g01318 778 MobiDBLite consensus disorder prediction 352 373 - -
Spst1g01318 778 Pfam Protein of unknown function (DUF1666) 527 776 IPR012870 -
Spst1g01318 778 Coils Coil 394 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01318 Spst-Chr1 16163465 16167123 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01318 - - gmx:100785051 1177.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01318 1 16163465 16167123 Spst1g01318 1 16163465 16167123 ECH
Spst4g00192 4 2109015 2120678 Spst1g01318 1 16163465 16167123 PCT