Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01315 ATGTTGCTTGAATTTGTTGAACCTGCTCCTATTTTTTCCCTTTTGAGATTGAGTCACTTGACAAGTATGTATACTGACGGTTACACTGCTCTTGTTACAAACTTATCTCCAAGAGCAACAGAGAATGATGTGCACAATTTTTTTGCTTATTGTGGTCTAATTGAGCATGTTGAAATAATAAGATCTGGTGAAAATGCATCTACTGCATATGTGACTTATCGGGATGCTTATGCCTTGGAAACTGCACTATTGCTGAATGGATCAATGATATTGGATCAATGTATATTCATTTCACGCTATGAAGCTTACATAAATGACTATGATAATTGGGGCGGTCATGTATCAAAGCCTGAAGACAGTATTACAACCTCACAAGATGTTCACATTGATAAGTTTGTTTCTTCCCCTGGAGAGGCACTAACTCTGGCTCAGATGGTTGTCAAAACAATGGTGGCTAAGGGATATGTGTTGGGTAAAGATGCATTTGTCATGGCAAAAGCCTTTGATGAATCTCATAATGTGTCATCTATAGCATCATCGAAGGTTGCTGAACTCAGCAATAAAATTGGGTTGACTGATACCATTAATTCAGGCATTGAAACTTTTAAATCTGTGGATGAGAAGTATCATGTCACAGACTTCACCAAATCAGCGGCAACAGTGACAGGAACTACAGCTATAGTTGTGGCATCAGTTACTGGGAAAGCTGCTGTGGCAGCTGGAAGTGCTATAGCCAACAGTAGCTACTTTGCCAAAGGTGCTCTTTGGGTTTCAGATATGTTGACACGTGCAGCCAAAGCAGCCGCTGATTTAGGTCAGAATGAAAAGAAATGA 834 0.3981 MLLEFVEPAPIFSLLRLSHLTSMYTDGYTALVTNLSPRATENDVHNFFAYCGLIEHVEIIRSGENASTAYVTYRDAYALETALLLNGSMILDQCIFISRYEAYINDYDNWGGHVSKPEDSITTSQDVHIDKFVSSPGEALTLAQMVVKTMVAKGYVLGKDAFVMAKAFDESHNVSSIASSKVAELSNKIGLTDTINSGIETFKSVDEKYHVTDFTKSAATVTGTTAIVVASVTGKAAVAAGSAIANSSYFAKGALWVSDMLTRAAKAAADLGQNEKK 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01315 277 SUPERFAMILY RNA-binding domain, RBD 23 102 IPR035979 GO:0003676
Spst1g01315 277 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 28 275 - -
Spst1g01315 277 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 28 102 IPR000504 GO:0003723
Spst1g01315 277 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 32 94 IPR000504 GO:0003723
Spst1g01315 277 SMART rrm1_1 29 98 IPR000504 GO:0003723
Spst1g01315 277 Gene3D - 18 103 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01315 Spst-Chr1 16116327 16120196 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01315 - - gmx:100784005 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01315 1 16116327 16120196 Spst1g01315 1 16116327 16120196 ECH