Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01305 ATGCTTGTAATATGCCTACTAACGAGTTCATTATCCGAAGGTTTTGATGGCACATTCACCCCAACAGGAAAGACAGAAAGCTGGTTAAACCATGGTGGGGATATATACAACAGAAGATATGCCAGAATGGAGCACAAGATCAGCGTTGAAACTGTTTCCAACCTAAGTTTGAAATGGAAGTTCATCGCAGGCAAAGACATAACTGCAACTCCAGCGATTTTCAATGGGATTCTCTACTTTCCATCGTGGAATGGGGATATTTTTGCAGTGAGAGCACGAGATGGACTTCTGGTGTGGAAGCAGAACTTGCAGAATCTAACGGGGTTAAATGCAACAGGGTTTGTGCCAGGTGTTAACTGGACAGTAGCAAGAGCAACACCAACCATAGCAGAGCATGATCTTTTGGTGGTTGGAATATATGGCCCTGCAGTTGTTATTGCTGTGAAGAGATCAACAGGAGAGTTAGTTTGGCAGACACGTTTGGACAGCCACAACTCAAGTGTTACCACCATGTCTGGAACCTATTACAAAGGGGCTTTTTATGTTGGGACATCTTCACTAGAAGAAGAACTCACACCTGAAGAATGTTGCACCTTTCGAGGAAGCTTCTCGAAGCTAGATATGAAATCTGGTGCCATTTTGTGGCAAACCTTCCTGCTACCTGATAATCATGGAGAAAAAGGAGGATATGCTGGTGCAGCTGTATGGGGAAGTAGCCCTTCCATTGATGCATCAAGGAACCTTATATATATTGCCACTGGAAACTTGTATTCTGTCCCTTTGAACATAAGTGAATGTCAAGAAAGAGAGAATAATTTAACACAACCCACTCATCCTGTTGAGTGTGTTGAGCCAGACAATCACTCTGATTCAATCCTTGCACTTGACTTGGATGATGGAAAAATTAAATGGGACCACCAATTGGGAGGATATGATGTGTGGCTCGCTTTATGCAGCAATTTGTCAACACCTAATTGTCCACCTGGTCCTAACCCAGATGCTGATTTTGGGGAGGCACCAATGATGCTCACGATTGTTGTCAACAAAACAAAAGAAGATGTTGTTGTTGCTGTACAGAAGAGTGGTTTCGCTTGGGCTTTGCACCGTGATGACGGCAAGCTTATTTGGTCTACGGAAGCTGGACCAGGTGGGGTTTCAGGAGGTGGAACATGGGGAGCAGCGACTGACAAAGAAAGGGTATACACTAACATTGTCAATTCGGAAAACAAGAACTTCACTCTCAAACCATCTAACGAGACCACAACAACTGGAGGGTGGGTGGCAATGGAGGCAAAGAGTGGCAAGATCTTGTGGTCCACAGCAAACCCTAGTAATGCCACTGTTCATGGCCCTGTTACTGTAGCTAATGGCATTGTCTTTGGAGGATCCACAAATGCAAAAGGACCCATTTATGCCATTAACGCTGAGACTGGCAACATTTTATGGTCCTATGAGACTGGATCTGCAGTGTTTGGTGGTATGTCTGTCAGTGATGGTTGCATATATGTTGGAAATGGATATCAGATAGGCATTGGATTGTTTTCAAATTATTCTGCTGGAACTTCGCTTTTTGCCTTCTGTGTCTAA 1587 0.4398 MLVICLLTSSLSEGFDGTFTPTGKTESWLNHGGDIYNRRYARMEHKISVETVSNLSLKWKFIAGKDITATPAIFNGILYFPSWNGDIFAVRARDGLLVWKQNLQNLTGLNATGFVPGVNWTVARATPTIAEHDLLVVGIYGPAVVIAVKRSTGELVWQTRLDSHNSSVTTMSGTYYKGAFYVGTSSLEEELTPEECCTFRGSFSKLDMKSGAILWQTFLLPDNHGEKGGYAGAAVWGSSPSIDASRNLIYIATGNLYSVPLNISECQERENNLTQPTHPVECVEPDNHSDSILALDLDDGKIKWDHQLGGYDVWLALCSNLSTPNCPPGPNPDADFGEAPMMLTIVVNKTKEDVVVAVQKSGFAWALHRDDGKLIWSTEAGPGGVSGGGTWGAATDKERVYTNIVNSENKNFTLKPSNETTTTGGWVAMEAKSGKILWSTANPSNATVHGPVTVANGIVFGGSTNAKGPIYAINAETGNILWSYETGSAVFGGMSVSDGCIYVGNGYQIGIGLFSNYSAGTSLFAFCV 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01305 528 SMART ire1_9 71 102 IPR018391 -
Spst1g01305 528 SMART ire1_9 451 485 IPR018391 -
Spst1g01305 528 SMART ire1_9 240 307 IPR018391 -
Spst1g01305 528 SMART ire1_9 172 218 IPR018391 -
Spst1g01305 528 SMART ire1_9 128 160 IPR018391 -
Spst1g01305 528 Gene3D - 18 507 - -
Spst1g01305 528 Pfam PQQ-like domain 283 484 IPR002372 -
Spst1g01305 528 Pfam PQQ-like domain 57 94 IPR002372 -
Spst1g01305 528 PANTHER QUINOPROTEIN ALCOHOL DEHYDROGENASE (CYTOCHROME C) 23 528 - -
Spst1g01305 528 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 25 493 IPR011047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01305 Spst-Chr1 15859102 15863314 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01305 - - gmx:100791552 908.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01305 1 15859102 15863314 Spst1g01305 1 15859102 15863314 ECH