Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01292 ATGGGAGGAATTCTTTCTTTTATCGTTGGCGCCGGCGGCGATGCCCCGTCGTACTCGGAGGAGCCTTCTTGCGTGGAGGTGTTCCACTCGTCGGCTCGTTGGCAGCTCCACTTCAACGAGCTCAAAAACACCACTAAGCTCATTGTGATAGATTTCTCGGCGTCGTGGTGCGGTCCTTGCAAAACCATAGAGCCAGTGATTCACGCCATGGCCAAAAAGTACACCGCGGTTGACTTCGTCAAGATCGATGTTGACGAATTATCGGATGTGGCACAGGAATTTCAGGTGCAGGCGATGCCGACGTTCGTGTTGGTGAAGGAAGGCAAGGAAATTGACAGGATTGTTGGCGCCAAGAAGGACGAGCTCGAGAAGAAGGTTCAGAAGCATTCATGA 393 0.5242 MGGILSFIVGAGGDAPSYSEEPSCVEVFHSSARWQLHFNELKNTTKLIVIDFSASWCGPCKTIEPVIHAMAKKYTAVDFVKIDVDELSDVAQEFQVQAMPTFVLVKEGKEIDRIVGAKKDELEKKVQKHS 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01292 130 NCBIfam thioredoxin 40 129 IPR005746 GO:0015035
Spst1g01292 130 SUPERFAMILY Thioredoxin-like 37 129 IPR036249 -
Spst1g01292 130 CDD TRX_family 37 127 - -
Spst1g01292 130 Gene3D Glutaredoxin 13 130 - -
Spst1g01292 130 Pfam Thioredoxin 38 127 IPR013766 -
Spst1g01292 130 PRINTS Thioredoxin family signature 48 56 - -
Spst1g01292 130 PRINTS Thioredoxin family signature 95 106 - -
Spst1g01292 130 PRINTS Thioredoxin family signature 56 65 - -
Spst1g01292 130 ProSitePatterns Thioredoxin family active site. 49 67 IPR017937 -
Spst1g01292 130 FunFam Thioredoxin 24 130 - -
Spst1g01292 130 ProSiteProfiles Thioredoxin domain profile. 9 130 IPR013766 -
Spst1g01292 130 PANTHER THIOREDOXIN 25 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01292 Spst-Chr1 15667723 15668326 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01292 K03671 - gmx:547759 192.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01292 1 15667723 15668326 Spst1g01292 1 15667723 15668326 ECH