Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01252 ATGCCCCAAGTCGCATTACATTTAGAGAAACTGATAAACTTACAAGAAGATCATAATCATAACAATGTTCCCTCCATGCAATCATCAAAACTCGCGAAAAGGTGGAAGGAGTACCATGGCATGAACAATTGGGACGGTTTACTAGACCCGTTAGACGATAATTTACGTGCTGAAATCCTACGGTACGGTCATTTCGTGGAAACTGCCTACAAATCATTCGAGTTTGATCCTTCTTCCCCCAACTATGCGAACTCTAGGTTCCATAAAAAAAATCTTTTTGAAAGGTGTGGTTTACCTAACACGGGATACAAGGTGACCAAGTACCTCCGTGCAACCTCAGGAATTCAGTTACCTAGTTGGGTTGACAAAGCACCAACATGGGTTGGAAAACAATCGAGCTATATTGGATATATAGCGGTGTGTCACAACAAGGAAGTGATCAAAAGGCTTGGTCGACGCGATATTGTGGTGGCATATAGAGGAACCACTACATGCTTGGAATGGTTAGAGAATTTCCGTGCCACTCTTACCAATCTCCCTATCTCAGGCCACACTAAAAGATGTTTTGAAAAAAGTGGGGCCATGGTAGAAAGCGGATTCTTGAGTTTGTATAATTCATCGTTTCCTGCAAAATCACCGTCTCTGCAAGAAATGGTGAGACGCGAGATATCAAGAATTCTCCAAACCTACCGCGGAGAGCATATGAGTTTGACTGTCACCGGTCATAGTCTGGGGGCAGCATTGGCCACTCTCACGGCGTATGACATCAAGGCCGCCCTTCCAGGCCTGCCGGTGACTGTAATCTCTTTTGGTGGGCCCCGCGTAGGGGATAGGAGGTTCCGACGACAACTTGAGAGGCAAGGGACCAAGGTTTTGCGGATAGTTAACTCTGAGGATGTGATCACCAAGGTTCCGGGGTTTGTGTTCGATGATGAGGTGGCGAGTGGTGGAAAGGTCCATGTGGCTGGGTTTCCGAGGTGGGTACAAAAGAGGGTGGAGGAGGCACAATGGGTGTACGCGGAGGTTGGGAGGGAACTGCGGTTATGTAGCAGGAATTCTCCTTACTTGGGAAACACGAACGTTGCAACATGTCACGAGCTCAACACCTATTTGCACCTTGTTGATGGCTTTATCAGCTCCACTTGTCCCTTTAGAGCCTCCGCAAAGAGGTTTCTCCGACGTTGA 1185 0.4734 MPQVALHLEKLINLQEDHNHNNVPSMQSSKLAKRWKEYHGMNNWDGLLDPLDDNLRAEILRYGHFVETAYKSFEFDPSSPNYANSRFHKKNLFERCGLPNTGYKVTKYLRATSGIQLPSWVDKAPTWVGKQSSYIGYIAVCHNKEVIKRLGRRDIVVAYRGTTTCLEWLENFRATLTNLPISGHTKRCFEKSGAMVESGFLSLYNSSFPAKSPSLQEMVRREISRILQTYRGEHMSLTVTGHSLGAALATLTAYDIKAALPGLPVTVISFGGPRVGDRRFRRQLERQGTKVLRIVNSEDVITKVPGFVFDDEVASGGKVHVAGFPRWVQKRVEEAQWVYAEVGRELRLCSRNSPYLGNTNVATCHELNTYLHLVDGFISSTCPFRASAKRFLRR 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01252 394 CDD Lipase_3 104 311 - -
Spst1g01252 394 Gene3D alpha/beta hydrolase 34 393 IPR029058 -
Spst1g01252 394 SUPERFAMILY alpha/beta-Hydrolases 60 308 IPR029058 -
Spst1g01252 394 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 10 390 - -
Spst1g01252 394 Pfam Lipase (class 3) 156 307 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01252 Spst-Chr1 14830550 14831734 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01252 19 394 Acyl Lipid Metabolism Gene Families AT2G44810 62.694 1.60e-176 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01252 K16818 - gmx:100800549 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01252 1 14830550 14831734 Spst1g01252 1 14830550 14831734 ECH
Spst4g00761 4 34451637 34452968 Spst1g01252 1 14830550 14831734 PCT