Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01187 ATGCGTTTTTGTCCGTGCTTTGGATCCGACGACGCCAGTGTGATGGCGGATCGAGACCCGGTTCTACTGGTTTCGGGCATGGGTGGCTCCATTGTGAATTCCAAGCCCAAGACGTTCGGGTTCACCACTCGGGTTTGGGTCAGACTCGTGCTCGCTGACATGGAGTTCCGCAAGAAGATTTGGTCCCTTTACAATCCCAAAACAGGCTACACTGAAACGTTGGACCAGAAGTCTAAGCTTGTGGTCCCTGACGATGACTATGGCCTCTATGCGATAGACGTTTTGGATCCATCGTGGTTTACGAAGTGTATACAATTGTCAGAGGTGTATCATTTTCATGACATGATTGAGATGCTTGTTGGATGCGGTTACAAGAAGGGAACCACGCTTTTTGGGTTCGGATATGATTTCCGCCAAAGCAATAGGATTAGCAAGTCAATGGAAGGTCTTAAACATAAGCTGGAGACTGCTTACAAAGCTTCTGGTGGAAGAAAAGTCAATTTAATTTCGCATTCCATGGGAGGAATTATGATTTCATGTTTCATGTCGCTTCACAGAGATGTGTTTACGAAATATGTGAATAAGTGGATTTGCTTGGCTTGCCCTTTCCAAGGAGCCCCAGGGTGCATCAATGATTGTTTATTAACTGGGTTAGAGTTTGTTGATGGCTTGCAAAGCTACTTTTTTGTGAAAAGGTGGACTATGCATCAACTGCTAGTGGAGTGCCCTTCAGTCTATGAAATGATGGCAAATCCATATTATGAGTGGAAAAAGCAGCCAGAAATTATAGTTTGGCGAAAGCATACCAAAGATGGGGACAACAATAGCAATTTGGAATCTTATGGACCAATAGAGAGTATCTCTTTATTTGAAGAAGCACTTAGGCATAATGAGCTAAGTTATAATGGGAAAACGATACCGCTGCCCTTTAACTTTGATATTCTTGACTGTGCTATTGAAACACGACAACTTACTGCTAATGCCAAACTACCAGATGGAGTCTGCTTCTATAACATTTATGGGACATCATTGGACACACCTTTTGATGTTTGTTATGGTTCGGAAAATTCTCCAATTGAGGACTTATCCGAAATTTGCCACACATTGCCACAATATTCTTATGTCGACGGAGATGGAACAGTTCCTGCTGAATCTGCGAAGATAGATGCATATGGAAATAGTCCTAATAGAAGGCCATTTGCTGATGGACTCAAAGCCATTGAAAGGGTGGGTGTTCCTGCTTCTCATCGTGGAATATTACGAGATGAAACAGTATTTCAACTTATTAAAAAATGGTTGGATGTTGAGCCAATTGTTAGCAAGCAATCTAAAACATCTAAAGTTGCAGATGCTGATCCAATCATGCCTATGAAAAAAGAAAAGAAGCTTCGAAAGACCTACGGTACCGTTCTTGGTGAAAGAAACAATTTGGCGCATGTGCTGGAAGATTCCTCAAGAAAAGCTGCCCAATGGGGTCAAAACCTTAGGATTAGTCAGCAGGTGATAAAACTTGTTAGAAAGGGGCAGTGTTTGTGCATGGATAAGGGTGAAAACAATCCTGCAACAAGCAGATGCTCAGAGAGAGAAATCATTCATAAAATAATGTCTGGTTTTCTTTCCGAGGAGGCACGGTAA 1635 0.4226 MRFCPCFGSDDASVMADRDPVLLVSGMGGSIVNSKPKTFGFTTRVWVRLVLADMEFRKKIWSLYNPKTGYTETLDQKSKLVVPDDDYGLYAIDVLDPSWFTKCIQLSEVYHFHDMIEMLVGCGYKKGTTLFGFGYDFRQSNRISKSMEGLKHKLETAYKASGGRKVNLISHSMGGIMISCFMSLHRDVFTKYVNKWICLACPFQGAPGCINDCLLTGLEFVDGLQSYFFVKRWTMHQLLVECPSVYEMMANPYYEWKKQPEIIVWRKHTKDGDNNSNLESYGPIESISLFEEALRHNELSYNGKTIPLPFNFDILDCAIETRQLTANAKLPDGVCFYNIYGTSLDTPFDVCYGSENSPIEDLSEICHTLPQYSYVDGDGTVPAESAKIDAYGNSPNRRPFADGLKAIERVGVPASHRGILRDETVFQLIKKWLDVEPIVSKQSKTSKVADADPIMPMKKEKKLRKTYGTVLGERNNLAHVLEDSSRKAAQWGQNLRISQQVIKLVRKGQCLCMDKGENNPATSRCSEREIIHKIMSGFLSEEAR 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01187 544 SUPERFAMILY alpha/beta-Hydrolases 17 423 IPR029058 -
Spst1g01187 544 Gene3D alpha/beta hydrolase 80 434 IPR029058 -
Spst1g01187 544 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 12 447 - -
Spst1g01187 544 ProSiteProfiles BRCT domain profile. 23 117 IPR001357 -
Spst1g01187 544 Pfam Lecithin:cholesterol acyltransferase 63 250 IPR003386 GO:0006629|GO:0008374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01187 Spst-Chr1 14164992 14177846 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01187 4 451 Acyl Lipid Metabolism Gene Families AT3G03310 65.859 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01187 K22389 - gmx:100797043 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01187 1 14164992 14177846 Spst1g01187 1 14164992 14177846 ECH