Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01184 ATGGCGGCGAGTAGGAGCACTTTACCTCTCATCAAATACCTGAGAGTGCGCGTGGACGCTCTTCCCCGCAACTCTCATTCAACCCTCGCTCCCACCTTCTTCCTCCGCCGCTTCTGCGAAGAGGTTCGTGGCTGCTTTCTCGACAAGTCCGAGGTTACAGATCGCGTCATCTCTTGCGTCAAAAACTTCCAGAAAGTCGATCCCGCCAAGGTTACCCCTAATGCTCATTTCCAGAATGACCTTGGATTGGATAGTTTGGATGCAGTAGAGATTGTTATGGCTCTTGAGGAAGAGTTTGGGTTCGAGATTCCTGATAATGAGGCTGATAAGATCAACTCTGTTAAACTTGCTGTGGATTTCATTGCATCTCATCCTCAGGCAAAGTAG 387 0.491 MAASRSTLPLIKYLRVRVDALPRNSHSTLAPTFFLRRFCEEVRGCFLDKSEVTDRVISCVKNFQKVDPAKVTPNAHFQNDLGLDSLDAVEIVMALEEEFGFEIPDNEADKINSVKLAVDFIASHPQAK 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01184 128 SUPERFAMILY ACP-like 48 124 IPR036736 -
Spst1g01184 128 Gene3D - 42 127 IPR036736 -
Spst1g01184 128 Pfam Phosphopantetheine attachment site 55 120 IPR009081 -
Spst1g01184 128 Hamap Acyl carrier protein [acpP]. 51 125 IPR003231 GO:0006633
Spst1g01184 128 ProSiteProfiles Carrier protein (CP) domain profile. 50 125 IPR009081 -
Spst1g01184 128 PANTHER ACYL CARRIER PROTEIN 4 126 IPR003231 GO:0006633
Spst1g01184 128 FunFam Acyl carrier protein 39 127 - -
Spst1g01184 128 NCBIfam acyl carrier protein 50 124 IPR003231 GO:0006633
Spst1g01184 128 ProSitePatterns Phosphopantetheine attachment site. 80 95 IPR006162 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01184 Spst-Chr1 14141482 14142997 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01184 10 128 Acyl Lipid Metabolism Gene Families AT1G65290 74.167 3.59e-61 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01184 K03955 - gmx:100305656 236.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01184 1 14141482 14142997 Spst1g01184 1 14141482 14142997 ECH