Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01180 ATGGATGCGATACGGAAGCAGCTCGATGTGTTGATGGGAGCCAACCGTAACGGCGACGTTCGTGAAGTCAATCGTAAGTACTACGATCGCGACGTCTGTCGCCTCTATCTCGTCGGTCTCTGCCCTCACGAACTCTTCCAGTTGACGAAAATGGATATGGGACCTTGCCCTAAGGTTCACTCCCTTCAGCTCCGGAAAGAGTATCCTTATCGATCTCTAGGGTTAGGATACGAGGAGGCGAAGGCGAAGGGGACTGATAATTATGATAGGGAATTGGAGGATGTTATTGATAAACTTATTGGTGAGTGTGATAGGAAAATTGGCAGGGCTCTTAAGCGCCTTGAGGACGAGGATGCAAAGGCTGCCATTGCGATTTCGGTCTCTGAAGTTACTCAGACGCCTGAGGTGCTTGAGCTGTCTAAGCAAATTAAAGAGAAGTTGAAAGAAGCTGATCAATATGATCTTGAAGGCAAGACAGATCTCAAGATTCGAGCTTTAGAGGTTGTAGAGGAACTTAGAACTAAGAGAGCAGACAAGCAGTCGATGCTTCTTTTAGATGCCTTTAACAAAGATAGGGCATCTTTACCTACACCTCTGCCAAATCCACCACCTTTGGCACCCATTCCTGTAGTTGCTCCTGATCCTCGAACGCAAGAGATGATAAATGAAAAGCTGAAGAAGGCTGAGGATCTTGGTGAGCAAGGAATGGTTGATGAGGCTCAAAAAGCATTGGAAGAGGCTGAAGCACTGAAGAAGCTTCCTGCCAGGCAGGAGCCAGTGTTAGATTCATCAAAGTATACAGCAGCAGATGTGCGGATTACTGATCAAAAGCTACGTGTGTGCGACATTTGTGGAGCATTTTTGAGTGTTTATGACAGTGACCGCCGATTAGCTGATCATTTTGGAGGGAAACTTCATTTAGGGTATATGCAGATTCGTGAGAAGTTAGCAGAACTTCAAGAAGAAAGGAACAAAGGTCGAAAGACTGACCGACATGATGACAGGAGATCAAAAGAACGGAGCAGGGATCGAGACAGGGAGTCGAGTAGGGACCGTGAACGTGGTGATAGTCGTGAACGAGGGAGAGACCATGATCGTAGGAGTAGAGACCGTGACAGGCATTATGATAGAGATCGTGGACATGACCGTGACCGAGACAGAGACTCTGATCGCACTCGTTCCTATGATTCAAGAAGTCGTCGGAGGTCACGCTCTAGATCCCGAGAGCGATCTAGAGATTATGATCGACATAGGCGTCATGATCGATACTAG 1272 0.4717 MDAIRKQLDVLMGANRNGDVREVNRKYYDRDVCRLYLVGLCPHELFQLTKMDMGPCPKVHSLQLRKEYPYRSLGLGYEEAKAKGTDNYDRELEDVIDKLIGECDRKIGRALKRLEDEDAKAAIAISVSEVTQTPEVLELSKQIKEKLKEADQYDLEGKTDLKIRALEVVEELRTKRADKQSMLLLDAFNKDRASLPTPLPNPPPLAPIPVVAPDPRTQEMINEKLKKAEDLGEQGMVDEAQKALEEAEALKKLPARQEPVLDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIREKLAELQEERNKGRKTDRHDDRRSKERSRDRDRESSRDRERGDSRERGRDHDRRSRDRDRHYDRDRGHDRDRDRDSDRTRSYDSRSRRRSRSRSRERSRDYDRHRRHDRY 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01180 423 PANTHER RNA-BINDING PROTEIN LUC7-RELATED 1 181 IPR004882 GO:0003729|GO:0005685|GO:0006376
Spst1g01180 423 MobiDBLite consensus disorder prediction 408 423 - -
Spst1g01180 423 MobiDBLite consensus disorder prediction 321 423 - -
Spst1g01180 423 Coils Coil 309 329 - -
Spst1g01180 423 MobiDBLite consensus disorder prediction 321 397 - -
Spst1g01180 423 Coils Coil 136 156 - -
Spst1g01180 423 Pfam LUC7 N_terminus 218 335 IPR004882 GO:0003729|GO:0005685|GO:0006376
Spst1g01180 423 Pfam LUC7 N_terminus 2 180 IPR004882 GO:0003729|GO:0005685|GO:0006376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01180 - - gmx:100793888 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01180 1 14096794 14102900 Spst1g01180 1 14096794 14102900 ECH