Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01179 ATGGCGACTCTTCCCCTTCTTCGCCCATGCTGCTTCCTTCCCACACCCACCCTCAAAACCTCACTCCCCAGACCCACACTCTTCCTCCCTCTCAAACCCAAAAACGGCGCCGTCGGGGCGCGCATGTCGAACACATCTCCTCCGCCAACGGAGCGCCTCATCTCCATCGCCGCTTACACTCTCCCATTCTTCAACTCCCTTCAATACGGACGCTATCTCCTGGCGCAGTACCCTAAGCTCGCCGTCGTCTTCGATCCCATCATTCCCTTCCTTGCCTTCTACAGATCCATTCCCTACGCCTCCTTCGTCGCCTTCTTCGCCCTCTACCTAGGCGTCGTCCGAAACCCTACCTTCCCCCGCTACGTCAGATTCAACGCCATGCAAGCCGTGACCCTCGACGTTCTCCTCGTTATCCCTCTCCTCATCACGCGCATCTTCTCCCCCGGTCGCGGGCCCCTCATAATCTGGTCCAACAACGCCATCTTCGTCTTCAGCATTCTCTGCTTCCTCTACGGCGTTGCTTCGTGTGTCTTGGGACGCACGCCGCATTTGCCCTTCGTCGCCGATGCTGCTTCCAGGCAAATCTGA 588 0.5833 MATLPLLRPCCFLPTPTLKTSLPRPTLFLPLKPKNGAVGARMSNTSPPPTERLISIAAYTLPFFNSLQYGRYLLAQYPKLAVVFDPIIPFLAFYRSIPYASFVAFFALYLGVVRNPTFPRYVRFNAMQAVTLDVLLVIPLLITRIFSPGRGPLIIWSNNAIFVFSILCFLYGVASCVLGRTPHLPFVADAASRQI 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01179 195 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 40 195 IPR005691 -
Spst1g01179 195 Pfam Chloroplast import apparatus Tic20-like 51 191 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01179 Spst-Chr1 14094295 14094882 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01179 - - vra:106779574 358.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01179 1 14094295 14094882 Spst1g01179 1 14094295 14094882 ECH