Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01178 ATGGCTATGTCTATGAAGGCCACGCCAATCACGGCTTCCGGGGTCGTTTCAATAGAACGTTCCACACTTCCACCCTTAAAATCATCATTTCTCGGCTACCGCTCAGGAGCACTGAAAGTTCCTGGTATAAGGGTATCCTACTCGGATAGATTGAAATGTGATTGTCATGGGGGCGGCGCCCTCGGTACTCAAATGAATCTTTTTAGCAGAATTGCTAGAGTTATCAAGTCATATGCTAATGCCATTATGAGCTCCTTTGAAGACCCTGAGAAGATATTAGAACAAGCTGTGCTGGATATGAACAATGATTTGATAAAGGTTCGCCAAGCTACAGCACAGGTTCTTGCATCTCAAAAGCAGTTAGAAGGCAAGTATAAATCTGTACAAAAAGCTTCTGATGAATGGTATAGAAGGGCACAACTTGCCCTTCAGAAGGGAGACGAGGATCTTGCCCGTGAGGCACTTAAGAGAAGGAAGTCGTATGCCGATAATGCAACTGCTCTGAAGACACAGCTTGATCAGCAAAAGAATGTTGCTGATGATCTTGTGTCCAAAACACAGCTTTTGGAGAGCAAGATACAGGAGGCTAAATCAAAGAAAGATACCCTCAAAGCAAGAGCTCAATCTGCAAAGACTTCAACCGTGGTCAGTGAGATGGTGGGCAATCTCAGCACAAGCAGTGCCCTTGCAGCTTTTGATAAGATGGAGGAAAAGGTATTAACCATGGAAGCTCAGGCAGATGCATTGAATCAGTTATCCACTGACAATCTTGAGGGCAAGTTTGCGCTGCTGGACAACTCTTCTGTCGATGACGATCTTGCTGAGTTAAAGAAAGAATTATCTAGAAGCTCAAAGAGGGGAGAACTTCCAGCTGGAAGAACTGTTTCCAGCAACAAAGAATTTCCCTTCACTGACTCGGAGCTTGAGAAAGAGCTTAATGAGCTCAGAAGAAGAGCAAGGGAGTACTAG 969 0.4458 MAMSMKATPITASGVVSIERSTLPPLKSSFLGYRSGALKVPGIRVSYSDRLKCDCHGGGALGTQMNLFSRIARVIKSYANAIMSSFEDPEKILEQAVLDMNNDLIKVRQATAQVLASQKQLEGKYKSVQKASDEWYRRAQLALQKGDEDLAREALKRRKSYADNATALKTQLDQQKNVADDLVSKTQLLESKIQEAKSKKDTLKARAQSAKTSTVVSEMVGNLSTSSALAAFDKMEEKVLTMEAQADALNQLSTDNLEGKFALLDNSSVDDDLAELKKELSRSSKRGELPAGRTVSSNKEFPFTDSELEKELNELRRRAREY 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01178 322 Coils Coil 266 286 - -
Spst1g01178 322 Pfam PspA/IM30 family 66 279 IPR007157 -
Spst1g01178 322 Coils Coil 305 322 - -
Spst1g01178 322 PANTHER MEMBRANE-ASSOCIATED PROTEIN VIPP1, CHLOROPLASTIC 23 322 IPR007157 -
Spst1g01178 322 Coils Coil 179 213 - -
Spst1g01178 322 Coils Coil 232 252 - -
Spst1g01178 322 MobiDBLite consensus disorder prediction 279 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01178 Spst-Chr1 14087809 14092499 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01178 K03969 - gmx:100794403 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01178 1 14087809 14092499 Spst1g01178 1 14087809 14092499 ECH