Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01176 ATGGCTAAATCTAGCGGGGTTTGGATTTTGCCGTTTATCACCGCCTGGTGGTGGCTGTCCACGGCGGCGATGGCGAGGGGTTCGAATTCGACGACGATTTACGACGAGCTTCGGGCGCAGGGTCTTCCAGTGGGGCTTCTTCCGAAGGGAGTTGCGAAGTACTCGTTGAACGGAACAAGTGGGGAATTCGAGGTGTGGATGGAGGAACCGTGCAACGCGAAGTTCGAGAACGAGGTGCACTACGATTCCAACATAAAGGGTATCCTCGGATTCGGTCGGATCGGGAAATTGTCCGGTGTGTCGGCGCAGGAGCTCTTTCTGTGGTTCCCTGTCAAGGGCATTCGTGTGGATGTTCCGACCTCTGGTCTCATACACTTTGATGTTGGTGTTGCGGATAAGCAGTTCTCTCTCTCGCTTTTTGAAGACCCTCCTGATTGTAAACCTCAGGTTGGTTTATCATCCTTCAATCTTCTAACCCCTTTGGTTTCTTTACAGTCTGGGAAATTTATGATTGTTTCTGATGGGTTTGTGAAATATATTTTGGTATTTATGAACAATTTGGTGTTCAATTCATTCAGGCTAAGGTTGGTGGTGAAGGTGTGCAAAGGGCTGCCTGGTAGAAAATAG 627 0.4912 MAKSSGVWILPFITAWWWLSTAAMARGSNSTTIYDELRAQGLPVGLLPKGVAKYSLNGTSGEFEVWMEEPCNAKFENEVHYDSNIKGILGFGRIGKLSGVSAQELFLWFPVKGIRVDVPTSGLIHFDVGVADKQFSLSLFEDPPDCKPQVGLSSFNLLTPLVSLQSGKFMIVSDGFVKYILVFMNNLVFNSFRLRLVVKVCKGLPGRK 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01176 208 PANTHER T31J12.3 PROTEIN-RELATED 25 147 IPR007493 -
Spst1g01176 208 SUPERFAMILY At5g01610-like 12 148 IPR036758 -
Spst1g01176 208 FunFam Uncharacterized protein At3g07460 20 151 - -
Spst1g01176 208 Gene3D - 18 149 IPR036758 -
Spst1g01176 208 Pfam Protein of unknown function, DUF538 34 141 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01176 Spst-Chr1 14077960 14080243 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01176 - - gmx:100778787 249.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01176 1 14077960 14080243 Spst1g01176 1 14077960 14080243 ECH