Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01159 ATGAGACAAAGAATGGAAAGGCTTGTGATTCTTCCTTTCTCTGCTGGTTGCATCTCCGAGGCCAGTGTTGCTGTTGGTGTTCCTCAGCCAAGAAGATCAAAACCAGACACCAATGCTTCACCTCCTACAATAAAAGGAGGTAAAGGTGTCGAGGATTCAGAGATCGTGTCTGGTGAAAACATGAAGAACTCCTTGAGGCTGATAGACGTTGTTCCAAAGCCAAACATTTCCAATGGCTTCAACAGGCTCTTCAAGGGTTTCAAGAATTTCTCTCAATTCTTTGTGGAGAAAGATGAGTACGAAGAAGTGGAAATGGACATGGAAATAGGGTGCCCTACAGATGTGCAGCATGTGACACACATCGGTTGGGATGGCATTGCAACTTCTGCGGATCATCCTCTCTTTCCTCCACAACTCCTCTCTCTATCCTCTCAATCTTCACACCACCATCACCTCTCCAACTTGGATTTCGATCCAAAACTTCAAACACCATCTTCTCCCATCAACCCTCCTCCTAATTAA 522 0.4521 MRQRMERLVILPFSAGCISEASVAVGVPQPRRSKPDTNASPPTIKGGKGVEDSEIVSGENMKNSLRLIDVVPKPNISNGFNRLFKGFKNFSQFFVEKDEYEEVEMDMEIGCPTDVQHVTHIGWDGIATSADHPLFPPQLLSLSSQSSHHHHLSNLDFDPKLQTPSSPINPPPN 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01159 173 CDD CRIB 107 125 - -
Spst1g01159 173 MobiDBLite consensus disorder prediction 28 51 - -
Spst1g01159 173 ProSiteProfiles CRIB domain profile. 109 122 IPR000095 -
Spst1g01159 173 Gene3D CRIB domain 105 163 IPR036936 -
Spst1g01159 173 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC2 1 148 IPR044509 -
Spst1g01159 173 Pfam P21-Rho-binding domain 108 126 IPR000095 -
Spst1g01159 173 SMART PBD_5 109 143 IPR000095 -
Spst1g01159 173 MobiDBLite consensus disorder prediction 150 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01159 Spst-Chr1 13921304 13922462 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01159 - - gmx:100787187 247.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01159 1 13921304 13922462 Spst1g01159 1 13921304 13922462 ECH