Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01157 ATGGCTCCGAGCTTCAACAACCGAAGAATTGCTCTCGCTCTTCGCATTTTCCTTCTCCTCTCCTTCTTCTTTAGCTTCTCATCCACCTTCGCTCAGGATTCGCTCTTGCAGAACGTGAAGGACGATTCCGGCGGATCTGTGGATTTCGGTCGCCGCGGCAAAATGGCGTTGAATGATATAGAGAATAGTTCGGTCTTTTCTCTTGGCTTGGAATCCTCTGGTCCTGGACTCTTCGATGCCTTTTTTGCGAGTCTATCGATGATCATTGTCAGCGAGATCGGGGATGAGACGTTTATAATAGCAGCTCTTATGGCTATGCGTCACCCTAAGTCAATTGTCTTATCTGGTGCGCTTAGTGCCCTGTTTATAATGACAGTACTTTCTACTGGGCTAGGCAGGATTGTGCCAAACTTGATTTCTAGGAAGCATACAAATAGTGCCGCTACAGTTCTTTATGCTTTCTTTGGGTTAAGGTTACTATACATTGCATGGAGATCAACAGATTCAAAATCCTCACAGAAGAAAGAAATGGAAGAAGTTGAAGAAAAACTGGAAGGTGGACAAGGGAAAACTACAATTCGACGTTTCTTTTCAAGATTTTGTACACCAATTTTTTTGGAGTCCTTTATTTTAACATTCCTTGCTGAGTGGGGTGATCGTAGCCAGATAGCAACAATTGCTCTGGCGACCCACAAAAATGCACTGGGAGTAGCAGTTGGGGCCACTATAGGACACACCATCTGTACCTCCCTGGCAGTGGTGGGAGGAAGCATGCTGGCATCCAAAATTTCCCAACGCTCAGTAGCCACTGTTGGTGGCTTGCTCTTCCTCGGATTTTCCGTATCTTCTTACTTCTACCCACCCCTATGA 870 0.4563 MAPSFNNRRIALALRIFLLLSFFFSFSSTFAQDSLLQNVKDDSGGSVDFGRRGKMALNDIENSSVFSLGLESSGPGLFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALSALFIMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRSTDSKSSQKKEMEEVEEKLEGGQGKTTIRRFFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVAVGATIGHTICTSLAVVGGSMLASKISQRSVATVGGLLFLGFSVSSYFYPPL 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01157 289 Coils Coil 170 190 - -
Spst1g01157 289 PANTHER TRANSMEMBRANE PROTEIN HTP-1 RELATED 64 286 IPR001727 -
Spst1g01157 289 Pfam Uncharacterized protein family UPF0016 83 156 IPR001727 -
Spst1g01157 289 Pfam Uncharacterized protein family UPF0016 207 279 IPR001727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01157 Spst-Chr1 13905582 13908531 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01157 K23541 - gmx:100785207 457.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01157 1 13905582 13908531 Spst1g01157 1 13905582 13908531 ECH