Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01151 ATGATAGGGTGGGAAGATGTGTACAAAGTGATAGTGGCAGTGGTGCCACTCTATGTTGCTCTGGTGTTGGGGTATGGTTCACTGAAGTGGTGGAACATCTTCACTAGGGAGCAATGTGATGCAATAAACAAGCTAGTATGTTACTTCACTTTTCCACTCTTTACTTTTGAGTTCACTGCTCACATCGACCCTTTCAAGATGAACTTTTCGTTCATAGCTGCAGACACCATATCAAAGTTCATCATCATAATGGTGCTTGCCCTATGGGCAAAGTACACTACTAAAGGGAGTTTTTGCTGGTCTATAACGAGCTTCTCTTTGTGTACTCTTACCAATGCTCTTGTTGTTGGGATTCCAATGGTGAAGCCCATGTATGGAGCCCTTGGTGAGGACCTAGTGGTCCAGTCCTCGGTGGTGCAGGCCATCATATGGCTTACTTTGCTTCTCTTTTTCTTGGAGTTTCAGAGAACAAGGATTGAAGGCACCACCTTGAAATCAAGCTCAAAAACAATGATTGTTGACAACACTAGTAATAATGTGACAGGTGAAGGTGGAAGAGTGAAAGACGTGGAGGAAAATACTGTAGCTATTGATGTGAAAGAGGAGTTGGTGTTGGAAGAAAGTGTTGGTAGTAGGCTTCCTTTTCGAGAGTTGATGAAACTTGTGTGGCTCAAACTTGTAGTGAACCCAAACTCCTACGGCTGTGTGATTGGCATATCCTGGGCTTTCATATCCAACAGGTGGAATTTGGAGATGCCAAGTATGTTAGAGGGGTCTATACAGATCATGTCAAAGGCAGGGACAGGCACTGCCATGTTCAGTATGGGTATTTTCATGGCACTTCAGGAGAAGTTGATTGCTTGTGGACCAAGTCTGACCGTATTCGGTTTGGTTTTAAAGTTCATTGCGGGCCCTGCAGCCATGGCTATTGGTGCCATCGCTGTAGGATTGCATGGTGACGTCTTGAAAGTTGCCATCATTCAGGCTGCTGTGCCACAGTCCATCACATCCTTCATTTTTGCTAAAGAATATGGATTGCATCCAGAAGTTCTGAGCACTGCGGTGATCTTTGGCATGATTGTTTCCCTTCCCATCTTAGTTGCATACTACGCAATATTGGAGTTTGTACATTGA 1134 0.4436 MIGWEDVYKVIVAVVPLYVALVLGYGSLKWWNIFTREQCDAINKLVCYFTFPLFTFEFTAHIDPFKMNFSFIAADTISKFIIIMVLALWAKYTTKGSFCWSITSFSLCTLTNALVVGIPMVKPMYGALGEDLVVQSSVVQAIIWLTLLLFFLEFQRTRIEGTTLKSSSKTMIVDNTSNNVTGEGGRVKDVEENTVAIDVKEELVLEESVGSRLPFRELMKLVWLKLVVNPNSYGCVIGISWAFISNRWNLEMPSMLEGSIQIMSKAGTGTAMFSMGIFMALQEKLIACGPSLTVFGLVLKFIAGPAAMAIGAIAVGLHGDVLKVAIIQAAVPQSITSFIFAKEYGLHPEVLSTAVIFGMIVSLPILVAYYAILEFVH 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01151 377 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 374 - -
Spst1g01151 377 NCBIfam auxin efflux carrier 1 373 IPR014024 -
Spst1g01151 377 Gene3D - 222 374 IPR038770 -
Spst1g01151 377 Pfam Membrane transport protein 10 370 IPR004776 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01151 Spst-Chr1 13861340 13863764 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01151 1 354 Organic Solute Cotransporters AT5G16530 67.797 1.79e-173 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01151 K13947 - gmx:100784879 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01151 1 13861340 13863764 Spst1g01151 1 13861340 13863764 ECH