Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01143 ATGGTGACCGCGGCGGCGTTCTTTTCTCGCCTCCGCCGCGCTCGGTCTTCCTCCTCCCTCTCTCTCCTATATTTTCCACGTGTCGTCTCCTCTCAACGCCCTTTTCCAGTTCCCGCTCCCGCCTTATCTCCCTCTCCAACCCTTGCTTTTCTCGACGCGTTCCGCTCACGCGCTTTCTCCACTCGCTCTTCCGACGACCGCGAATCGGAGTTGAACTCGTTAGGTGTCGACTCGCTGGTTAACTCGGAGTTTCTGAAAGTGATCACGGATACCGGTGGCGGCGGTGAAGACGACGCCATTTTCCCCGTTCGCGCGCTCATTTCGATTCTCGATTCGTTCCACGAGCTTTCTGGATTTCCTTGGTGGTTAACTATAGTTTCTTCTACTCTAGCTCTCAGAATTGCTATTCTTTTTCCTCTGGTTTTAACACTTCACAAGCTGAAAACGATTGGAGAGTTTTTTCCTAAATGTGAGTATCATATGCATTACTCGGATTATGCCTCCTCCATTCCCACCACCTTTCTCAGGAAAGAGTTATATTCGTCAGTTTCTATTCTTCCAGAAGAAGAGAAAAGCGATTGGATGCCCCTCTTATTTGTGGCCGTTGGTACCATTCATTGTACAGCCAAAAGCAGCCTCCTACTAGGAAAGCTGTTTTGTGACAAGGATGAACGAAATTCACATGTTCCGTGCTTTTTCCTGTGGATGATTAGCATAAGGAAGATGTCACTGAATGGTTACCCTGGTTTTGATTGTGGCGGTGCTTTATGGTTCCAGAATTTAACAGAACTCTCTCACGGTTATTCAGGGTTCATCTTTCCTTTTCTGATTGCTGGTTTGCACTACATCAATGTTCAGAGATCCTTTGGGAAACCTGTGGTTGCAGAGACAAGGGGTATTTTTGACTTATTAGCCAAATATTATAAGCGATACTTGGACTTTCTAACATTGCCTATTGCTTTCATGGGCTTTTGCATTCCTCAGGGGAGCCAACTCTATTGGGTTACCAATAGTTCTCTTACCCTCATTCAGCACATAACCCTTACACATCCTTCTGTCCTTGCAATGTTGGGGTTACAAGACAAGAATAGTCAAAAGGTAGCTTCTGAGAAAATTAGTGCTTCTAAAACAGCTCCTTCAATAGGGTTACAAGATAATATTCCAACAGCAGCTATCAAGGGAACTGTTTCTCCAGAAAAAAGTCCTCTGAGTTCACCTGAAAAATGGCATAGAATACCTATAGAGGAGATGTCCCCTAAAGAACTGACTACTCTTGCAGTCCCATTTCTATCCAGTGAGGATAAAGAAAGTGCAATTCCCTTACTAAAACTAGCCCTTGAGAAGGACCCTGAATATGTTCGAGCTTTAGTATTGATGGGACGGATTCTATTACTAAAGCATGTGAATGATGAAGCTAAAGAGTACTTTGAGCGTGCAATATCAAAACTTTCTTTTGCTGGATATCCAACTGATGCGGAAGAACTGGATCTTTTGATTCTTTCATCCCAGTGGGCTGGAATTGCCTGCGAACGACAGGGAAAGAGGGACGAAGGACGGGCACACTTTGAAAGAGTAGCAAATATGGAGGAGCCAGAAGATCCTACAAGCAAAGGCTATTATTTTGATGGGTTACTCTTGCTTGCCAGCACTCTATTTGATGCGGGACAAAAGGCCGAAGCCGCGAAGTACCTACGTCTTGTTGTTGCTCGTAAACCTGCTTATAAAAAATTCTTGGACCAGTGTGAACAAGATGATGATATTGCGAGTGATGTTGCCCGTAGTAGGAGAGAATACTAA 1797 0.4469 MVTAAAFFSRLRRARSSSSLSLLYFPRVVSSQRPFPVPAPALSPSPTLAFLDAFRSRAFSTRSSDDRESELNSLGVDSLVNSEFLKVITDTGGGGEDDAIFPVRALISILDSFHELSGFPWWLTIVSSTLALRIAILFPLVLTLHKLKTIGEFFPKCEYHMHYSDYASSIPTTFLRKELYSSVSILPEEEKSDWMPLLFVAVGTIHCTAKSSLLLGKLFCDKDERNSHVPCFFLWMISIRKMSLNGYPGFDCGGALWFQNLTELSHGYSGFIFPFLIAGLHYINVQRSFGKPVVAETRGIFDLLAKYYKRYLDFLTLPIAFMGFCIPQGSQLYWVTNSSLTLIQHITLTHPSVLAMLGLQDKNSQKVASEKISASKTAPSIGLQDNIPTAAIKGTVSPEKSPLSSPEKWHRIPIEEMSPKELTTLAVPFLSSEDKESAIPLLKLALEKDPEYVRALVLMGRILLLKHVNDEAKEYFERAISKLSFAGYPTDAEELDLLILSSQWAGIACERQGKRDEGRAHFERVANMEEPEDPTSKGYYFDGLLLLASTLFDAGQKAEAAKYLRLVVARKPAYKKFLDQCEQDDDIASDVARSRREY 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01143 598 Gene3D Tetratricopeptide repeat domain 412 596 IPR011990 GO:0005515
Spst1g01143 598 Pfam Tetratricopeptide repeat 544 573 IPR019734 GO:0005515
Spst1g01143 598 SMART tpr_5 541 574 IPR019734 GO:0005515
Spst1g01143 598 SMART tpr_5 453 486 IPR019734 GO:0005515
Spst1g01143 598 SMART tpr_5 419 452 IPR019734 GO:0005515
Spst1g01143 598 CDD 5TM_Oxa1-like 118 351 - -
Spst1g01143 598 PANTHER OXA1 64 362 IPR001708 GO:0016020|GO:0032977
Spst1g01143 598 SUPERFAMILY TPR-like 423 574 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01143 - - gmx:100797573 801.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01143 1 13783527 13795857 Spst1g01143 1 13783527 13795857 ECH