Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01137 ATGGGTGCCACGTGGAACGATGCCGATAACAACAGTCAAACTGTGGAGAAAGCATCAAAAAAGAGTGAAGAAAAAACAGTGGATACTAGTGATGGGAAAATGCCATGTTTCAAACAGTCAGATTGTTCATCATTGCTTCCACATCCAAATACTGGTTCCACCAAGACAGGAGAGCTTGGAAATTATGATGCAACAGAAATGATGGCTGCTGCACATGAATCATTTTCAACGAAGCATCCATGTGAGGATAACATCAAGAGGGATGTTGATGAGTTGCCCACAGTAGAAAAGGCTTCAGATACTGATTGCTATACCCAGAGAAATTCCTATGCCAGTGAAAGTAATGGATGTGACAACTGTTCTAATAAAATTATTTCCCTGCCAGTTGAATTGGATGCTGGCAATAATTTTAATGTAGTCAACTCAGAAACATTTATCACAAGGGATATCAGTTCTGCACAAGTCAATAAATCTCCTGTTTCGAATAATTCAATGGATGAACCTACTGATTCACGCTCTAAATATAATATCAGAAACCCATCTGGAGATATGGTTTTTCAGACCAACTTGGCTAGTCCATTAGTAACCTTCAATCGATGTTACAAAAGAAAAAAGAGGTTAGATGGAAATGGCAAACAAAGCAGCTTATCGCACAAGGAGGAAAGCATTTCAGTATTAACCAAGTGGAGTATGCTTGCAAATACCAATCCATGTTCTAGTGATGAATCATCTAGTGAGGAATGTCCTGTAGATAATGTACCTGACCTTAATCAATCAGTGGAGCTTTCAGAAAAAGGGAAGGCATTGAATGAAAAGCAGGATGAAACATCTTGTAGAAGTTGCTCTATGGTTTTTCTGACAGACCTTAATCAATCTGCTGAGCTTACAGAAAGAGGGGAGCTTTGTCAAACTCAAGAAAAAGTATGGCTTCCTGGTGATTCCCTTAAACCTTATGGTTTGTCCAAAGTACTGATTCTCCCTGTTCCCCTGCGGTTGTTTCTGGAAAATGACATGAGAGAGCAACTTTGTCATGGGGAAGACACGGTAAAAAATGCCTCTGATAAAGACAGAAGAGAACTGAGCCACAGTTGTCTGATTCACAAGGAAGACCATCATCTTCATAAGGATTGCCAGGGGGTCTCTACCAAAGTTGATTCTAGAGATCCCTATCGTGCAGCCAAAGGCACTGATCAGGAACTAGAAAAGTCCCAAATCTTGTCTTGCGAGGCCAGTGAAAATGTTTTCTGCAATGACATGATGAAAACTGGAGAACACCAACTTCAGTTTGACCTGCCTAATAATTCTGCTGCATTTTCATGTGGTACAGAAGAGCACATTGTGGATTTAAACTTGGGTGCTGAGAAGCATCCCCTTCATTCGAGGATGAGAGTTCGTGGACCTAAATTGGAATCTACAAGCAGTTGTTCTGCCATTGCTGAAGATAAAGTTTCTGATTTGGACTTTTTAAATGCTAGAAACACACAGCTGATTTCAGAAGGAAAGGCTATAGTTGGTGTTTGCTCAACTAGTACCCAACCTCAGGTAATGATGACTGAAGAAAGAATGAGTGCTCAACAAACAAAAACCGATAAAGCAAAACTGATGCCAACTATTTCTCTTTCTTTGGGTTTGTCTTTACCTGTGGAGCTCAAGACCAGAGGCAATGATTCTGTTAATAGTTTGTCAGTATTGCCTGTGTTACATTCAACTACTGAAACTAGAGATACTGTCCAAGATGGATTATGTCTGTCTTCATCTCCAACTCTGAAGCCATTGCATCCCAAGCACCAGGTAGTACTAGACAACATTGTACACAGAACAAGAGCTTTAAATGAAAGGGGAAAATTTCAAGAATATTTGAAGCCACACCCTATCATGTGGTCTGAAGAGGAGTTGGATTTTCTCTGGATTGGTGTGAGGAGACATGGTAGGGGCAATTGGGAGGCCATGCTAAGGGATCCTAGATTGCGGTTTTCACCATTAAGGGTACCAGGGGACCTTGCTGAGAGGTGGGAGGATGAACAATTAAAACTTTTGAACGATATAGACCTTCAACAGTTCATGTATCCAGCAGCAGAAAGGGCAGCAGCAGTGGCATCATTAGGAAACATTTGCTACTTGGATTCTAAATCAAGTTTCTGGGAGAGTAACCCTTTGAAGAAACCTCTTAACAGATATAATTTTCAGAGTAACACCACTGCGCACAGTCATAGGCTAACTACTCATTCCAGAAAGGCCAATTACAGCAACATAGACAAGTATGAGCCAGGATTTTTCAATTCTCCTAGCTTGAGCATTTCCAAGCAGAACTCTTACTCGAATGACTATTCCTTTAATTGTTCCGCAGCCACAAATAATTTGCCCCACTGGCTCAGAGAAGCTGTTAACACTCCTCCTCCAGTCATGCCAAATATGTCTGCGGTGATTTCATTGAGTTCTCATCCAGACATGCTGGGAGCTTCAGATCATTGCTTTAATACCAGCAAGTCATGCTTTGTACCTCAAAATTGGTTCAATGGTTTGAGGCCAAATGAGCTACACATGCCAAATGGTTCTCACTATTCAACTTATTCAAGAAGAAAATATGGGGTGGTGAAGATGAACAAGTGTCTCGACCATTGTGTCCGGAAACAGGATGATTTGATTATTATTGATAGTGGCACTTCTTCTGAAGAGACCATATCTGACGATCACCGTGCCAGCTTGTAG 2709 0.4105 MGATWNDADNNSQTVEKASKKSEEKTVDTSDGKMPCFKQSDCSSLLPHPNTGSTKTGELGNYDATEMMAAAHESFSTKHPCEDNIKRDVDELPTVEKASDTDCYTQRNSYASESNGCDNCSNKIISLPVELDAGNNFNVVNSETFITRDISSAQVNKSPVSNNSMDEPTDSRSKYNIRNPSGDMVFQTNLASPLVTFNRCYKRKKRLDGNGKQSSLSHKEESISVLTKWSMLANTNPCSSDESSSEECPVDNVPDLNQSVELSEKGKALNEKQDETSCRSCSMVFLTDLNQSAELTERGELCQTQEKVWLPGDSLKPYGLSKVLILPVPLRLFLENDMREQLCHGEDTVKNASDKDRRELSHSCLIHKEDHHLHKDCQGVSTKVDSRDPYRAAKGTDQELEKSQILSCEASENVFCNDMMKTGEHQLQFDLPNNSAAFSCGTEEHIVDLNLGAEKHPLHSRMRVRGPKLESTSSCSAIAEDKVSDLDFLNARNTQLISEGKAIVGVCSTSTQPQVMMTEERMSAQQTKTDKAKLMPTISLSLGLSLPVELKTRGNDSVNSLSVLPVLHSTTETRDTVQDGLCLSSSPTLKPLHPKHQVVLDNIVHRTRALNERGKFQEYLKPHPIMWSEEELDFLWIGVRRHGRGNWEAMLRDPRLRFSPLRVPGDLAERWEDEQLKLLNDIDLQQFMYPAAERAAAVASLGNICYLDSKSSFWESNPLKKPLNRYNFQSNTTAHSHRLTTHSRKANYSNIDKYEPGFFNSPSLSISKQNSYSNDYSFNCSAATNNLPHWLREAVNTPPPVMPNMSAVISLSSHPDMLGASDHCFNTSKSCFVPQNWFNGLRPNELHMPNGSHYSTYSRRKYGVVKMNKCLDHCVRKQDDLIIIDSGTSSEETISDDHRASL 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01137 902 ProSiteProfiles Myb-like domain profile. 627 675 IPR001005 -
Spst1g01137 902 MobiDBLite consensus disorder prediction 14 31 - -
Spst1g01137 902 MobiDBLite consensus disorder prediction 43 57 - -
Spst1g01137 902 CDD SANT_TRF 625 671 - -
Spst1g01137 902 SUPERFAMILY Homeodomain-like 624 672 IPR009057 -
Spst1g01137 902 MobiDBLite consensus disorder prediction 1 57 - -
Spst1g01137 902 Gene3D - 589 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01137 Spst-Chr1 13746725 13754605 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01137 - - vra:106759339 1275.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01137 1 13746725 13754605 Spst1g01137 1 13746725 13754605 ECH