Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00927 ATGGCATACAGGAGAAGGCAAGGTATATCCAGGGCTTCCACTTTCAAGGAAGAATTTCATGATCCATCATCATTGGATGGTGTTAAGGATTCTGATCATGACAATGCTTCTCCATCAATCTTCTCACCTCCCTCTTCAACTTCTTCATCATCTCTCGCAGCTCAAGCCGTCAAAGCTTCTTCTTCTCGTAACCAACCCTCTCTTTCCTTTGCTTTTTCCCCCCCTGAGTCCGACCAACAAAGATCCAAGAGCTTTGAGGCTTATACAAATGGCAACTCCAAGTCTGGTTTCTGGGGTGTGATTGCGCAAAAAGCCAAATCAATTCTGGATGATGATAATAAGCCAATCCCAGAACATGACACCAAGCCCCAAACACCCAAATCACAGTCATCTAGTACCGATTCAGCCCCTTCTGCAACTCAGAACTCTCCTTCACAATTAAGGCCAGTATATGAATCCCTCGACATTAACAGAAAAGTGGAGAATCCTAAATTTCGGAAGGGCTTGGATAGAATTACTTCATCCCTCAATCAACTAGGTGACACTTTTGAGAAGGCTTTTGAGGAAGGCCGAACAATTGTGGAGAGTAAGACAGCAGATCTGAGAACTCAAATCAGAAGAAAAGGAAATAACTCCGGGGACACAAACCAAACTTCAGATTTGAGAAACCCATTGCAAGAAGCAGCCCAGATAGAGAAGCTGTCTAACCATGAAACGAAACTCAAGGCATCACGCGACGTGGCGATGGCAACAGCTGCGAAAGCCAAATTACTTCTTCGGGAACTAAAATCCGTTAAAGCAGATTTGGCTTTTACTAAAGCAAGGTGTGCTCAACTTGAAGAAGAAAATAAAATACTCCGGGACCGAGAGGGCAGTGAGAAGGGACAGAACCGTGAAGATGAAGATGATATGATAAGGCATCAATTGGAGACACTTCTTGCTGAGAAGGCTCGTCTGGCGAATGAGAATGAGACATATTCTAGGGAGAACCGTTTCTTAAGAGAAATTGTGGAGTACCATCAGCTGACCATGCAGGATGTGGTGTACATAAATGAGGGCATGGAAGAAGTTACTGAAGTTTACCCTTCAGATTCATCTGGGATGACACGGTTGCTATCAGTCTCTTCATCACCTGACAAGGATGTTCTGCTGTCACCAAGGCCACCTATGCTGTCAAAAGAATTATTTACTGTGATAGAAGATGAGGCTCCTTCTACTGTCTCAGTTTCTCCACATACAAAATGA 1245 0.4394 MAYRRRQGISRASTFKEEFHDPSSLDGVKDSDHDNASPSIFSPPSSTSSSSLAAQAVKASSSRNQPSLSFAFSPPESDQQRSKSFEAYTNGNSKSGFWGVIAQKAKSILDDDNKPIPEHDTKPQTPKSQSSSTDSAPSATQNSPSQLRPVYESLDINRKVENPKFRKGLDRITSSLNQLGDTFEKAFEEGRTIVESKTADLRTQIRRKGNNSGDTNQTSDLRNPLQEAAQIEKLSNHETKLKASRDVAMATAAKAKLLLRELKSVKADLAFTKARCAQLEEENKILRDREGSEKGQNREDEDDMIRHQLETLLAEKARLANENETYSRENRFLREIVEYHQLTMQDVVYINEGMEEVTEVYPSDSSGMTRLLSVSSSPDKDVLLSPRPPMLSKELFTVIEDEAPSTVSVSPHTK 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00927 414 MobiDBLite consensus disorder prediction 1 95 - -
Spst1g00927 414 PANTHER UNCHARACTERIZED 1 390 - -
Spst1g00927 414 MobiDBLite consensus disorder prediction 205 222 - -
Spst1g00927 414 Coils Coil 309 336 - -
Spst1g00927 414 MobiDBLite consensus disorder prediction 10 33 - -
Spst1g00927 414 MobiDBLite consensus disorder prediction 200 222 - -
Spst1g00927 414 MobiDBLite consensus disorder prediction 122 150 - -
Spst1g00927 414 MobiDBLite consensus disorder prediction 108 155 - -
Spst1g00927 414 Coils Coil 262 289 - -
Spst1g00927 414 MobiDBLite consensus disorder prediction 35 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00927 Spst-Chr1 11481756 11484411 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00927 - - gmx:100819083 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00927 1 11481756 11484411 Spst1g00927 1 11481756 11484411 ECH
Spst1g00927 1 11481756 11484411 Spst4g00858 4 36331928 36333647 PCT