Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00682 ATGAATCCTACTACCACTCAACCCCCACCGCCGTCGTTACCACCGCCGTCGCTTCCGCCGCCGCCGCAGCTACAGCCTCACCGCCACTCCACCTCCTGCGACCGCCACCCTCAGGAGATTTTTACCGGCTTCTGCCCTTCATGCCTCTGCGAGCGCCTCGTCGGGCTCGATCCCAACTCCTCCTCTTCTTCCGCCGCCACACGCAAGCCGCCGAGCTCCTCCACCGCCGCTGCCGCCCTTAAGGCCATCTTCCGCCCTTCCGCCGCAGCGCGCCGCCCTCCGCCCTCCTCCCTCTCGGAGCTCCGCCGCACCAAGTCCTTCTCCGCCTCCAAAAACGAAGCCCTCTCCGGTTTCTTCGAACCGCAGAGAAGATCCTGCGACGTGAGAGCTCGTAGCACCCTCTTCTCCCTTTTCAACCAGGAAGCCGAAGTCGAAACGCGGCACGTTCCCTCCTCCTCCGTCGTTCAGAAACCCGTTCTCGAGTCTGAGGAGGAAGAAGACGAGGACGACGAAGAAGATAACATTGTCGTTCAAGACGCAAACGACATTATAGTTCCCGAATCCCCTCAACCCCAACCAACTAACATAGAAAATAGAGTTTCAGAAATCGTAGAGGAGGAATCAGAAACAGTACCCGAACCCGAAGTAGCAGACGTGGCAGACGAAGACGCTCTCAAGGCAATGAAGGACCACATGGATCTGGACTCGCAAACAAAGAAAACGTCTGGTCGCGACCTGAAGGGAAGTTTCTGGTCCGCGGCTTCGGTCTTCAGCAAGAAGCTTCAGAAGTGGAGGCAGAAGCAGAAGATGAAGAAGCGCGAGCGCAACGGCGTCGTTGTGGGCTCCGGCACCCTACTCCCCGTCGAGAAGCCTATCGCGCGCCAATTCCGCGAAACGCAGTCGGAGATCGCCGACTACGGCTTCGGCCGCCGCTCCTGCGACACCGATCCGCGCTTCTCGCTCGACGCCGCGCGAATGTCGTTCGATTTCGAGGAGCCGCGAGCCTCCTGGGACGGTTATTTAATGGCGAGGACCGCGCCGACTTTCGCCGTTCCTCCGAGGATGCCTACGATGATCGAAGACGCGCCGGCGCCGGTTCAGGTTCTCAGAACAGATTCCCTCATTCCCGTGGAGGAGCCTGAATATGAGGAGACTCTCACTCTTAATCTAAATCACAATCCTAATCTTAATGCTAATCATAATGTTAATGTTAATCCTAATCTCCCTGGTGGTTCTACCCAGACGAGGGAGTATTATTCGGACTCTTCCTCGCGGAGGAGAAAGAGTCTTGATAGGTCTAGTTCCATTAGAAGGACTGCTGCTGCTGTTGTTGCTGAAATGGATGAGTTGAAGAGTGTTTCGATTGCTAGTGCTACTACTAATGCTAGGGTTACTCCTGCTGCTTCTGCTGATTATGTTCACAATCCCTTGAGGGACTCCAATTCGAATTCGAATTCTTTGAGGGATGATGGTTGTGAGAAAGGGGCTTCTAAGAAGTCATCAAGCAGGTGGAGCAAGGCGTGGAGTATATGGGGTTTGATTCACCGAAGAGGGAGTAAGGAGGAGGATGGTGCAGGGAATGGGAATGGGAATGGCGTGGAGAGGTCGTACTCGGAGTCATGGCAGGAGTATAGAGGTGGGGAGAGAAATGGAGATGTTAGAGGCGGTGCTTTTAATCCGAAGATGATGAGGAGTAACAGCAGTGTGAGTTGGAGGAATGCGCAGGGTATAGGTGGTGTTGGTGGTGGTGGAGGGTTTGGGAGTGTGAGTATGAGGAAGAGTGATGTGCAGGGGAATGGGCTTGGGCTTGGGCTTGGGCTCGGTGGTGGTGGTAGGAAGGGGAGGGATGAGTTTGTTGGTTTGGAGAGGAACCGGAGTGCAAGATACTCGCCAAACAACATTGATAACAATGGTCTCTTGAGGCTCTACTTGGGTGGCCGGAGAAATGGGTCCGGGAAAGGAAGGTCGAACCAGGCACATTCTATTGCCAGGAGCGTTCTCCGGCTGTATTGA 2013 0.5514 MNPTTTQPPPPSLPPPSLPPPPQLQPHRHSTSCDRHPQEIFTGFCPSCLCERLVGLDPNSSSSSAATRKPPSSSTAAAALKAIFRPSAAARRPPPSSLSELRRTKSFSASKNEALSGFFEPQRRSCDVRARSTLFSLFNQEAEVETRHVPSSSVVQKPVLESEEEEDEDDEEDNIVVQDANDIIVPESPQPQPTNIENRVSEIVEEESETVPEPEVADVADEDALKAMKDHMDLDSQTKKTSGRDLKGSFWSAASVFSKKLQKWRQKQKMKKRERNGVVVGSGTLLPVEKPIARQFRETQSEIADYGFGRRSCDTDPRFSLDAARMSFDFEEPRASWDGYLMARTAPTFAVPPRMPTMIEDAPAPVQVLRTDSLIPVEEPEYEETLTLNLNHNPNLNANHNVNVNPNLPGGSTQTREYYSDSSSRRRKSLDRSSSIRRTAAAVVAEMDELKSVSIASATTNARVTPAASADYVHNPLRDSNSNSNSLRDDGCEKGASKKSSSRWSKAWSIWGLIHRRGSKEEDGAGNGNGNGVERSYSESWQEYRGGERNGDVRGGAFNPKMMRSNSSVSWRNAQGIGGVGGGGGFGSVSMRKSDVQGNGLGLGLGLGGGGRKGRDEFVGLERNRSARYSPNNIDNNGLLRLYLGGRRNGSGKGRSNQAHSIARSVLRLY 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00682 670 MobiDBLite consensus disorder prediction 58 114 - -
Spst1g00682 670 MobiDBLite consensus disorder prediction 99 114 - -
Spst1g00682 670 PANTHER PROTEIN: UPF0503-LIKE PROTEIN, PUTATIVE (DUF740)-RELATED 21 667 IPR008004 -
Spst1g00682 670 MobiDBLite consensus disorder prediction 519 538 - -
Spst1g00682 670 MobiDBLite consensus disorder prediction 58 74 - -
Spst1g00682 670 MobiDBLite consensus disorder prediction 420 434 - -
Spst1g00682 670 MobiDBLite consensus disorder prediction 467 500 - -
Spst1g00682 670 MobiDBLite consensus disorder prediction 393 419 - -
Spst1g00682 670 MobiDBLite consensus disorder prediction 1 26 - -
Spst1g00682 670 MobiDBLite consensus disorder prediction 475 490 - -
Spst1g00682 670 MobiDBLite consensus disorder prediction 1 36 - -
Spst1g00682 670 MobiDBLite consensus disorder prediction 145 174 - -
Spst1g00682 670 Pfam Protein of unknown function (DUF740) 20 648 IPR008004 -
Spst1g00682 670 MobiDBLite consensus disorder prediction 393 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00682 Spst-Chr1 9000610 9002622 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00682 - - gmx:100799446 837.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00682 1 9000610 9002622 Spst1g00682 1 9000610 9002622 ECH
Spst1g00682 1 9000610 9002622 Spst4g01366 4 51268207 51270150 PCT