Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00678 ATGGCTAGCTTGGCGTTCAACAGAACCAATCCTTACCCTTCCTCTTCTCAACAACATCCCAATTCCCAACACAATCACAATCTTTCTGTCCCTTCCTTCTGTGGGCCTCTCTATCCACAGCACCCTATCAGACCTTTGCATCCAAATTCTCCTTTCAGGAAACACCCTCTTCGTCTCTTTCACCCCAATCCCTTCAAACTTACACCCCCAACATACTTTCACCTCTTTCCCCAACTGGATTCTCTTCAAAATCTGATTTTTTTTGCCCCTGCTTTTCTGAAAGCCATGAATTTCAGGAACTTGGAGGATTTCTGGGCCTTTTATGTCAACCAGCACTCGAAGCCATCCACGAGAAGGTGGCACTTTGCGGGCACGCTCTTCAGTATTTTCTTCTTGCTCTGTTCATTTTTCTTCAGCTGGTGGTTTTTGTTCTTTGTGCCCTTTTCTGGGTATGGTTGTGCCTGGTACAGTCACTTCTTTGTGGAAGGGAATGTTCCAGCAACTTTTGGACACCCCTTTTGGTCGCTCTTGTGTGATTTCAAGATGTTTGGATTGATGCTTACTGGGAAAATGGATAGAGAGATCAAGAGGCTTGGGAAAAGACCTGTGTTGCAAGTGTTCTGA 624 0.4535 MASLAFNRTNPYPSSSQQHPNSQHNHNLSVPSFCGPLYPQHPIRPLHPNSPFRKHPLRLFHPNPFKLTPPTYFHLFPQLDSLQNLIFFAPAFLKAMNFRNLEDFWAFYVNQHSKPSTRRWHFAGTLFSIFFLLCSFFFSWWFLFFVPFSGYGCAWYSHFFVEGNVPATFGHPFWSLLCDFKMFGLMLTGKMDREIKRLGKRPVLQVF 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00678 207 Pfam 2-hydroxy-palmitic acid dioxygenase Mpo1-like 98 191 IPR009305 -
Spst1g00678 207 MobiDBLite consensus disorder prediction 1 26 - -
Spst1g00678 207 PANTHER TRANSMEMBRANE PROTEIN 95 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00678 Spst-Chr1 8956366 8957469 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00678 - - gmx:100804127 280.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00678 1 8956366 8957469 Spst1g00678 1 8956366 8957469 ECH
Spst1g00678 1 8956366 8957469 Spst4g01364 4 51103450 51103788 PCT