Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00603 ATGTCTTGTGCTGTGGACTCGGTTCGGGACCCTTTCAACAACTCATGGAAAACCCTTCGTTTCCCCAACATCAAACCCAGCGAACTTCTCCTTTTGTTCCTCAAAGCGGGTCTTGCGGCTTCAACCTTCTTCCTCATAACTCTAGTTTTTCACCTTACCCTATCCTATAGCCAACCCCATTACCATAACAACAACCACACATCCGTCAAATACGTCGTCCAACCACAGAAAACCACCCAGGAACAACCACCCGCCAATATCTCCCACCTCTTCTTCGGTATTGGCGGCTCTGTGGCCACCTGGGACACACGCCGCCAATACTCAGAACTCTGGTGGCGCCCCGGTGTCACAAGAGGTTTTGTGTGGCTCGACAGACACCCAGGGAATTCGACTTGGCCGGAGACCTCACCGCCATATAAGGTCTCCGGCAACACCTCAGCGTTCAATTACACGTGTTCATACGGGTCGCGATCAGCTATTCGTATAGCACGGATTGTGAAGGAGAGCTTCGAGCTAGGGGTGGAAAACGTGAGGTGGTTCGTCATGGGTGATGACGACACCGTTTTCTTCACCGACAACCTCGTTATGGTGTTGTCGAAGTATGATCATAATGAAATGTACTACGTGGGTGGGAATTCCGAGAGTGTTGAACAGGATGTTATACATTTTTACACAATGGCGTTTGGTGGTGGTGGGTTTGCGATTAGTTACCCTTTGGCGAAGGAGTTGGTGAGAATTTTGGACGGTTGCATTGATCGTTACGCGGAGTTTTATGGCTCTGATCAGAAAATTCAAAGTTGTATCAGTGAGATTGGAGTTCAGGTGACCAAAGAACCAGGTTTTCATCAGGTAGATATACATGGGAGCCCTTATGGATTGTTAGCGTCACATCCGGTGGTACCACTGGTTTCGTTGCACCACTTGGACTACGTGGACCCAATATTCCCCAACATGACCCGGGTTGAAGCCGTTAGAAAATTGATGACAACGTACGAAACGGACTCGGGTCGGGCCCTGCAGAAGAGCTTCTGTTACGACCTCCGTCGAAACTGGTCCGTTTCAGTGTCGTGGGGCTACAGCGTTGAGATATATCCCTCTCTACGCACGGTCAAGGAACTAGAAATGGCATTTCAGACTTTCCGCACGTGGCGGAGTTGGAGCGATGGCCCGTTTACTTTCAATACTCGACCCGTTAGTTCTGACCCATGCGAGAAACCAGTCGTTTATATGCTGGATCGAGTTCTGAACGTGGGCGGGAATAAGACGCGGTCTATCTACAGAAGGCACAGAGACTCGTCGGGGAACGTGTGCGCGCGTGAAGACTACGTGCGGGTTTCAGTAGTCCAATACGTCGACGTTTACGCACCGCACTTAATATCGGAGGCGTGGAAAAAGGCGCCACGTAGGCAATGCTGCGAGATAATGAACGGGTCAGATGGAATGGATAAAAACGTGATTAGTGTCAAGATGAGAGGGTGTCATCGTTTCGAGAGTGTGACTCCTCCGTAG 1509 0.5023 MSCAVDSVRDPFNNSWKTLRFPNIKPSELLLLFLKAGLAASTFFLITLVFHLTLSYSQPHYHNNNHTSVKYVVQPQKTTQEQPPANISHLFFGIGGSVATWDTRRQYSELWWRPGVTRGFVWLDRHPGNSTWPETSPPYKVSGNTSAFNYTCSYGSRSAIRIARIVKESFELGVENVRWFVMGDDDTVFFTDNLVMVLSKYDHNEMYYVGGNSESVEQDVIHFYTMAFGGGGFAISYPLAKELVRILDGCIDRYAEFYGSDQKIQSCISEIGVQVTKEPGFHQVDIHGSPYGLLASHPVVPLVSLHHLDYVDPIFPNMTRVEAVRKLMTTYETDSGRALQKSFCYDLRRNWSVSVSWGYSVEIYPSLRTVKELEMAFQTFRTWRSWSDGPFTFNTRPVSSDPCEKPVVYMLDRVLNVGGNKTRSIYRRHRDSSGNVCAREDYVRVSVVQYVDVYAPHLISEAWKKAPRRQCCEIMNGSDGMDKNVISVKMRGCHRFESVTPP 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00603 502 Gene3D - 77 336 - -
Spst1g00603 502 PANTHER FRINGE-RELATED 39 497 - -
Spst1g00603 502 FunFam Fringe-related protein-like 77 332 - -
Spst1g00603 502 Pfam Protein of unknown function, DUF604 218 472 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00603 Spst-Chr1 7838226 7840460 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00603 7 501 Glycosyltransferase AT2G37730 55.750 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00603 - - gmx:100813750 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00603 1 7838226 7840460 Spst1g00603 1 7838226 7840460 ECH
Spst1g02204 1 30448495 30450622 Spst1g00603 1 7838226 7840460 ECH