Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00456 ATGATTCAGCTGTTGTTCTTGGTGATTTTTGTTGAGGGGGTTCTGGCATTTCTTTTATTGGTGAAGATAGGACCATTGAGAGATCTTGTGATAAAGACCCTGGATCAGTTGAAGATGGGGAAGGGTCCAGCTACAGTAAAAACTATTGCAGGTACCATGTTTGTGATTCTCCTTTCAAGTCTCATGAGCATTGTCAAGATCCAGAACAAAGGTGCTAAACTTGGTACTATGTCTCCCATGGATCAAGTTCTGTGGAGAACTCACTTGCTAGAGGCTTCCCTTATGGGTTTTACATTATTCCTTGGATTCCTAATTGATCGTATCCACCATTATCTTCAAAAACTTGTCAATTTAAGGAGTAATGCAGGAGCTTCAAAAGAAGAATTGGAAAAACTTAAAAGGGAAACTGTCCAACTTAGAGAAAAGGATGGGAAATCTTCCACGGAGATAAAACAGCTGAAGGAAGAACTTTCACTTGTGTCTAAAAGTTTGAAAAAGATTAAATTGGAATCTGAAGAGAAGGACAAGAAAGTTGAGACTGCTGAAGCACATGTTGCTTCCCTCCAAAAGCAAGCCGCAGATCTACTACTTGAATATGACAGACTCTTAGAAGAGAATCAAAATCTTCAGGCTCAAACACTGGGACATAGGAGTTGA 657 0.3957 MIQLLFLVIFVEGVLAFLLLVKIGPLRDLVIKTLDQLKMGKGPATVKTIAGTMFVILLSSLMSIVKIQNKGAKLGTMSPMDQVLWRTHLLEASLMGFTLFLGFLIDRIHHYLQKLVNLRSNAGASKEELEKLKRETVQLREKDGKSSTEIKQLKEELSLVSKSLKKIKLESEEKDKKVETAEAHVASLQKQAADLLLEYDRLLEENQNLQAQTLGHRS 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00456 218 Coils Coil 150 212 - -
Spst1g00456 218 Gene3D - 149 209 - -
Spst1g00456 218 Coils Coil 115 142 - -
Spst1g00456 218 PANTHER BCR-ASSOCIATED PROTEIN, BAP 1 210 IPR008417 GO:0005783|GO:0006886|GO:0016020
Spst1g00456 218 FunFam B-cell receptor-associated protein 29 146 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00456 Spst-Chr1 5997947 6001141 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00456 K14009 - gmx:100793884 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00456 1 5997947 6001141 Spst4g01509 4 53947935 53951576 PCT