Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00427 ATGAACTACCTAACATGTTTTTTACTCTTGTTGTTGCCTGCACTGTCTTCCTCCCAGTATCTTGGGAACATCCTTCTAACTAATCGTAAGATATTCCCCAAACAAGAAGAAGCCGTTACCTCTTATGCTGTGATCTTTGATGCTGGTAGCACTGGAAGTCGTGTTCACGTCTTCCACTTTGACCAGAATTTAGATCTCCTTCACATTGGCAATGATCTCGAGTTTTACAAAAAGGTCACACCCGGTTTGAGTTCTTACGCAGATGATCCTGAAAAAGCTGCAGAATCTTTGGTTCCACTTTTGGAGGCTGCTGAAAATGTTGTCCCTGAGGATCTGCATCCCAAGACACCCCTTAAGCTTGGGGCAACGGCAGGTTTAAGGTTGTTGGAAGGGGATGCTGCAGAAAATATATTGACAGCGGTTAGGGATATGTTCAACAACAGAAGTACCCTGAACGTTCAATCAGACGCAGTAGCTATAATTGATGGAACCCAAGAAGGTTCATATCTATGGTTGGCAATTAACTATCTATTGGGGAGATTGGGGAAAAAGTTTAGTAAGACAGTGGGAGTAGTTGATCTTGGAGGTGGATCAGTTCAAATGGCCTATGCTGTCTCAAGGAACACTGCAAAAAATGCTCCAGTAGCACCTGATGGAGAGGATCCATACATAAAGAAGCTATTTGTCAAGGGCAAAAAATATGATCTCTATGTTCACAGTTACTTGCACTTTGGTAAAGAAGCATCTCGTGCTGAGATTTTGAAGATCACCAATGGTGCAGCTAACCCTTGCATTTTGGCTGGATATGATGGGACCTACACATATTCAGGAGTGGAGTATGCAGTGTACCCTCCAATTTCAGGGTCCAGCTATGACGCATGCAGAGACATAGTCCTTGAGGCTCTCAAAGTGAAGGAGCCATGTTCCCACCCTAACTGCACTTTTGGTGGGGTATGGGACGGTGGAAGAGGAAGTGGACAGAAAACTATCTATGCTACTTCATCTTTCTATTACCTGGCCTCAGATGTTGGTATCATCGCTGCAAACGCACCCAGTGGCATAGCTCGTCCTGTGGATTTTGAGAGTGTAGCTAAGAAATCTTGCGGACTAACATTTGAAGATGCCAAAATCGCTTATCCTCTTCTTACTGAAGAAAGAATTCCATGGGTATGCATGGATAGTGTATACCAGTATACGTTGCTTGTTGATGGATTTGGTCTAGATCCTTTTCAAGAGATTACAGTGGCAATCGAAATTGAATATGAAGATGCTGCTGTGGAAACAGCATGGCCTCTTGGCACAGCCATTGAAGCCATATCAGCATTGCCTAAATTTGATCGGTTTATGTATTTCATGTAA 1359 0.4334 MNYLTCFLLLLLPALSSSQYLGNILLTNRKIFPKQEEAVTSYAVIFDAGSTGSRVHVFHFDQNLDLLHIGNDLEFYKKVTPGLSSYADDPEKAAESLVPLLEAAENVVPEDLHPKTPLKLGATAGLRLLEGDAAENILTAVRDMFNNRSTLNVQSDAVAIIDGTQEGSYLWLAINYLLGRLGKKFSKTVGVVDLGGGSVQMAYAVSRNTAKNAPVAPDGEDPYIKKLFVKGKKYDLYVHSYLHFGKEASRAEILKITNGAANPCILAGYDGTYTYSGVEYAVYPPISGSSYDACRDIVLEALKVKEPCSHPNCTFGGVWDGGRGSGQKTIYATSSFYYLASDVGIIAANAPSGIARPVDFESVAKKSCGLTFEDAKIAYPLLTEERIPWVCMDSVYQYTLLVDGFGLDPFQEITVAIEIEYEDAAVETAWPLGTAIEAISALPKFDRFMYFM 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00427 452 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 14 441 IPR000407 GO:0016787
Spst1g00427 452 FunFam Apyrase 1 162 420 - -
Spst1g00427 452 Pfam GDA1/CD39 (nucleoside phosphatase) family 38 442 IPR000407 GO:0016787
Spst1g00427 452 CDD NBD_sugar-kinase_HSP70_actin 44 203 - -
Spst1g00427 452 Gene3D - 42 436 - -
Spst1g00427 452 Gene3D Exopolyphosphatase. Domain 2 162 422 - -
Spst1g00427 452 FunFam Ectonucleoside triphosphate diphosphohydrolase 5 42 171 - -
Spst1g00427 452 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 161 176 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00427 Spst-Chr1 5646807 5650618 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00427 41 441 Calmodulin-binding Proteins AT3G04080 54.478 1.77e-153 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00427 K14641 - gmx:100781628 696.041