Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00396 ATGGAACCCCAAGCCAAATCTATGGAGGTGAAACTCATTTCCTGCAAGAACATCAGAGCCTTCAACTTTTTCCAAAAGCTCACACTTTACGCCACCGTCTTCATCGATAGCGAGGATCCCAAGAGGGAAATCACGGAGGAACGGAAGCAGCGGCAGCGAACCCTAACGGACAGAGACAGCGAGAGCGACGGCAGCAACCCCGAATGGAACTACCTCGCGCGTTTCGATTTGGGGTGCCTTTCGCACTCGCCGCACGACTCCGACTTTGGTCATCTCTTCCTCTGCTTCGAGTTCCGCCACGACGGCACCATCCTCGGCGACAAGGTCGTCGGCGAGTGCCGCGTGGCGCTCGCCAATATGATCCGCGATGCCGGCACTGACTCGGCGAGGTTCGTTAGCTACGAGGTTCGCTCCGCCGAGGGGAAGCCCAACGGGATCTTCAATTTCTCGTACAAATTGAAGGGCATGGGAATTGGGATTGGGAATGGGAATGGAAGTGGAAGTAGGATCCACTCGTCGCAGATTCTCGAAGGGAGAATCTCCGGGTACCCGGTTCTGGCGCCGGAGGATTGCGCGTGTGCTCCCAATAGAGTACAATATCCCACGTGCGAAATCGATAACACGTGCTGCTACCCGACGGTCGCGTTGCCGGTGGGATCTCCCGTGTATCCCCCCACTGCTCCACCACCGGCGGTTATGTTTCGTCCGAACGGAGACTATCATTGCGATTACCCACGCCCGCCGCCTCCGCCGGATCCGGTGGTGTATCCATACTCTCCCTTGCCACCTCCGGTGGTGTATCCCTACCCTCCCCCGCCTCCACCAGTGGTGCATGCTTACCCGCCTTTTGGGCCCGAGGCCCATCCTTGGCCACAAGGTCCATATTGTGAACGCAGGTGGTAA 903 0.5803 MEPQAKSMEVKLISCKNIRAFNFFQKLTLYATVFIDSEDPKREITEERKQRQRTLTDRDSESDGSNPEWNYLARFDLGCLSHSPHDSDFGHLFLCFEFRHDGTILGDKVVGECRVALANMIRDAGTDSARFVSYEVRSAEGKPNGIFNFSYKLKGMGIGIGNGNGSGSRIHSSQILEGRISGYPVLAPEDCACAPNRVQYPTCEIDNTCCYPTVALPVGSPVYPPTAPPPAVMFRPNGDYHCDYPRPPPPPDPVVYPYSPLPPPVVYPYPPPPPPVVHAYPPFGPEAHPWPQGPYCERRW 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00396 300 ProSiteProfiles C2 domain profile. 1 131 IPR000008 -
Spst1g00396 300 PANTHER INGRESSION PROTEIN FIC1 6 181 - -
Spst1g00396 300 MobiDBLite consensus disorder prediction 43 64 - -
Spst1g00396 300 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 124 IPR035892 -
Spst1g00396 300 CDD C2_SRC2_like 7 149 IPR044750 GO:0006952
Spst1g00396 300 SMART C2_3c 7 129 IPR000008 -
Spst1g00396 300 Gene3D C2 domain 1 149 IPR035892 -
Spst1g00396 300 MobiDBLite consensus disorder prediction 43 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00396 Spst-Chr1 5179786 5180688 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00396 - - gmx:106796391 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00396 1 5179786 5180688 Spst1g00396 1 5179786 5180688 ECH