Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00395 ATGGAGGTACATTCTCCTGTTGTGGCAAAGAGATTATGGAATGTGATGAGGGTAACCTTCTTCATGATAAGGAAGGGTCTTATATCAAAGAGGAACATGATCATGGACATGAACCTCATGATGAAGAAAGGGAAGGTGGTGAGAAAATCTTTTAGCAATCTCATACCATCACATCACCACCACCACCACCAGAAGAACCCTAAGAGTGTGACAAGAGGAGGCTTAGGGGTGCATTATGAATTCTCATGCAGCAATAGTCCAAACCCTGTTTTCTTCTCCATGCCAAAGCGCAAGCACCATTTCAACTTTCCCTGCATCCATGCCCCTGAAGTTGTCGAAGATGAACATCGTTTTTCATTCGAAGTTGAAGGTGAGGTGCCTAAAGGTGTGGTAGTTCCCAAAACCCCAGAGTATACGTACAACTTTTTTGTTCCTGGAGAAAAAAAGAGCCCTCTTCTCTCACCGTTTTCTGTGAGGGTGTCCAACTATTCTGCATTGGATGAAACTGAAGAAGTTGGAAATGATCGTGTTGATGATCAGGCTGAGGATTTCATCAGAAGATTCTATGAACAGCTTAGGACACAAAGCCCCGTGCAGTTCCTCCGTTAA 609 0.4384 MEVHSPVVAKRLWNVMRVTFFMIRKGLISKRNMIMDMNLMMKKGKVVRKSFSNLIPSHHHHHHQKNPKSVTRGGLGVHYEFSCSNSPNPVFFSMPKRKHHFNFPCIHAPEVVEDEHRFSFEVEGEVPKGVVVPKTPEYTYNFFVPGEKKSPLLSPFSVRVSNYSALDETEEVGNDRVDDQAEDFIRRFYEQLRTQSPVQFLR 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00395 202 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 5 199 - -
Spst1g00395 202 Pfam Cotton fibre expressed protein 175 196 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00395 Spst-Chr1 5177122 5177730 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00395 - - gmx:100806803 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00395 1 5177122 5177730 Spst1g00395 1 5177122 5177730 ECH