Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00386 ATGGGACTCCTTAAACACTTTTTTATTGCTGTGATTTCACTCTCACTCTTTTTGAGTATAGATGCTGAGGAAACAAAATCCTCACAGGGTTGTGGTTTTCCAGCCATATTCAACTTTGGTGACTCCAATTCAGACACTGGCTGCATGTCAGCAGCATTTTACCCAGCAGCTTTGCCATATGGTCAGACCTTCTTTCATGAGGCAGCAGGGAGAGCTTCTGATGGTCGCCTTATTGTAGACTTCATTGCCAAGCATCTAGGTTTGCAATACTTGAGTGCATATATAGACTCAGTTGGATCAAGCTATGGCCATGGTGCAAACTTTGCTGCATCATCATCAACCGTTAGGAGGCAGAACAGAACCTTCTTTGATGGTGGTAGTCCTTTCAGTCTTGAAATTCAGGTCGCACAGTTTATCCAATTTAAGACTCGCACAGCCAAGTTCTACAAGCAAGGACAGGGAAATTCCTTTCCAAGGCCAGAGGACTTTGCCAAAGCCATCTATACATTCGACATTGGGCAAAATGACATTGCTGCTGCTCTCCAAAGAATGGACCAGGAAAATTCTGAAGCAGTGATCTCAGACATAGTGGACCAATTTTCAAACCTGCTTATATATTTATACAGTGAAGGAGCAAGAACATTCTGGATCCACAACACAGGCCCCATTGGGTGCCTCCCAGTGGCCATGCCTATACACAATGCCTACAATTATACTCCAGTGGCTGGATATCTTGATCAAAACGGCTGCGTCGTGCATCAGAACGATATGGCCAAAGAGTTCAACAGAAAGCTCAATGATTCAGTGGTCAAACTGAGGGCACTGTACCTTGATGCCTCATTTGTGTATGTGGACATTTTCTCTGCAAAGTATGAGCTAATCAGTAATGCTAAGAAACAAGGATTCGTTGACCCATCTGAAATTTGTTGTGGAGTTCATGAGGGTGGCATGCACTTCTTCTGTGGGAATTACAATGCTAGTATTAATGGCAGAGAAGTTTATGCTGGTTCATGCCAAGATCCTTCATCACACATTAGCTGGGATGGTGTGCACTACACTGACGCAGCAAATAACTGGATCGCAAATCGCATTGTCACTGGATCATTCTCAGATCCACCTCTTCCTATTACACATTCATGCTCGTTAGCGTAA 1152 0.4384 MGLLKHFFIAVISLSLFLSIDAEETKSSQGCGFPAIFNFGDSNSDTGCMSAAFYPAALPYGQTFFHEAAGRASDGRLIVDFIAKHLGLQYLSAYIDSVGSSYGHGANFAASSSTVRRQNRTFFDGGSPFSLEIQVAQFIQFKTRTAKFYKQGQGNSFPRPEDFAKAIYTFDIGQNDIAAALQRMDQENSEAVISDIVDQFSNLLIYLYSEGARTFWIHNTGPIGCLPVAMPIHNAYNYTPVAGYLDQNGCVVHQNDMAKEFNRKLNDSVVKLRALYLDASFVYVDIFSAKYELISNAKKQGFVDPSEICCGVHEGGMHFFCGNYNASINGREVYAGSCQDPSSHISWDGVHYTDAANNWIANRIVTGSFSDPPLPITHSCSLA 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00386 383 Gene3D SGNH hydrolase 21 367 IPR036514 -
Spst1g00386 383 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 9 373 - -
Spst1g00386 383 Pfam GDSL-like Lipase/Acylhydrolase 36 364 IPR001087 GO:0016788
Spst1g00386 383 CDD SGNH_plant_lipase_like 34 368 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00386 Spst-Chr1 5044943 5047572 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00386 34 371 Acyl Lipid Metabolism Gene Families AT4G10950 27.429 1.24e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00386 - - gmx:100793845 670.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00386 1 5044943 5047572 Spst1g00386 1 5044943 5047572 ECH