LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst1g00373	ATGGCTTCCTCTGAAACAGACGATGACCCAAGATCTGTAAAAAGAGTAGCGGTTGTTGGTGCTGGGGTAAGTGGGCTTGCTGCGGCTTACAAATTGAAATCACATGGTCTGGATGTCACTGTATTTGAAGCTGAAGGAAGAGCTGGAGGGAGGTTGAAAAGTGTTTCTCGGAATGGCCTAATTTGGGATGAGGGAGCCAATACAATGACTGAAAGTGAAGTTGAGGTTAAAGGTCTGATTGATGCTCTTGGACTTGAAGAAAAGCAACAATTTCCATTATCACAGCATAAACGGTATATTGTGAAAAATGGGGCACCAGTTCTGGTACCCACAAATCCTGCTGCACTTCTGAAGAGTAAACTATTGTCTGCACAATCAAAGATCCAGGTCATTTTTGAACCATTTATGTGGAAAAGAAGTAACCCCTCTGATGTGTGTGATGAAAATTCTGAGGAAAGTGTTAGAAGCTTCTTTCAACGTCATTTTGGGAAAGAGGTTGTGGACTATCTGATTGATCCTTTTGTTGGAGGAACTAGTGCAGCAGATCCTGAATCTCTTTCTATGCGCCATTTTTTCCCAGAGCTGTGGAATTTGGAGAAAAGGTATGGTTCCGTTATTGCTGGGGCATTGCAATCTATGTTATTTGCCAAAAGGGACAAAACTGGAGAAAATAAGACCGTGCTAAGAAAAAATAAACCCAAGCGTGGTTCATTTTCTTTCCAGGGTGGGATGCAGACTCTGACAGATACATTGTGCAATGAGCTTGGGAAAGAGAACCTTAAATTTAATTCAAAGGTTTTAACATTAGCTTATGGTCATGATAAAAGTTCCTCATCACAAAACTGGTCTATTACTTGTGTTTCTAACCAAAGTACACAAGGTGTTGATGCAGTAATCATGACGGCTCCTCTATATAATGTCAAGGACATCAAGATTACAAAAAGGAGAACCCCCTTTCCACTTAATTTTCTTCCCGAGATAAGCTACGTGCCAATCTCAGTCATGATTACAACATTCAAAAAGGAGAATGTAAAGAGACCTTTGGAGGGTTTTGGAGTTCTTGTTCCTTCTAAAGAGAGACAAAATGGTTTACGAACACTTGGTACACTTTTTTCCTCTATGATGTTTCCAGATCGTGCACCTAGTGATTTATATCTCTATACCACTTTCATTGGCGGAACCCAAAACAGGGAACTGGCTCAAGCTTCAACCGATGAACTTAAGAAAATTGTTACTTCTGACCTGAGAAAGTTGTTGGGAGCAGAGGGGGAACCAACATTTGTTAACCATTTCTATTGGAGTAAAGGCTTTCCTTTGTATGGACGTAACTATGGATCAGTTCTTGAAGCAATTGATAAGATGGAAAAAGATCTTCCTGGATTTTTCTTTGCAGGTAACTACAAAGGTGGACTCTCAGTTGGCAAAGCAATTGCCTCAGGCTGCCAAGCAGCTGATCTTGTAATATCCTACCTCAACTCTGCTTCAGACAACACAGTCCCTGACAAGTGA	1509	0.4089	MASSETDDDPRSVKRVAVVGAGVSGLAAAYKLKSHGLDVTVFEAEGRAGGRLKSVSRNGLIWDEGANTMTESEVEVKGLIDALGLEEKQQFPLSQHKRYIVKNGAPVLVPTNPAALLKSKLLSAQSKIQVIFEPFMWKRSNPSDVCDENSEESVRSFFQRHFGKEVVDYLIDPFVGGTSAADPESLSMRHFFPELWNLEKRYGSVIAGALQSMLFAKRDKTGENKTVLRKNKPKRGSFSFQGGMQTLTDTLCNELGKENLKFNSKVLTLAYGHDKSSSSQNWSITCVSNQSTQGVDAVIMTAPLYNVKDIKITKRRTPFPLNFLPEISYVPISVMITTFKKENVKRPLEGFGVLVPSKERQNGLRTLGTLFSSMMFPDRAPSDLYLYTTFIGGTQNRELAQASTDELKKIVTSDLRKLLGAEGEPTFVNHFYWSKGFPLYGRNYGSVLEAIDKMEKDLPGFFFAGNYKGGLSVGKAIASGCQAADLVISYLNSASDNTVPDK	502

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst1g00373	502	PRINTS	Adrenodoxin reductase family signature	38	51	-	-
	Spst1g00373	502	PRINTS	Adrenodoxin reductase family signature	15	37	-	-
	Spst1g00373	502	Pfam	Flavin containing amine oxidoreductase	23	488	IPR002937	GO:0016491
	Spst1g00373	502	FunFam	Protoporphyrinogen oxidase	109	215	-	-
	Spst1g00373	502	SUPERFAMILY	FAD/NAD(P)-binding domain	14	491	IPR036188	-
	Spst1g00373	502	SUPERFAMILY	FAD-linked reductases, C-terminal domain	328	438	-	-
	Spst1g00373	502	Gene3D	-	15	484	IPR036188	-
	Spst1g00373	502	PANTHER	PROTOPORPHYRINOGEN OXIDASE	12	495	-	-
	Spst1g00373	502	NCBIfam	protoporphyrinogen oxidase	14	492	IPR004572	GO:0004729\|GO:0006779
	Spst1g00373	502	Gene3D	Protoporphyrinogen oxidase, mitochondrial; domain 2	51	440	-	-
	Spst1g00373	502	Gene3D	protoporphyrinogen ix oxidase, domain 3	109	215	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst1g00373	Spst-Chr1	4909772	4918839	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst1g00373	K00231		-	gmx:547941	903.279