Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00359 ATGAGGATCTACGAAGAGTTGAGAGAGATTGTGAAGATTCAGAAGTTCCGAAGATTTGTGTCGTATACTGGGTTCTACTGCTTCGCGACGCTCATAAGCTACGCTTACGTCAGCAATACGACAAGGGCTGGTTACTCTAGAGCCGATCAATTCTACGCGTCGTACCCCGCTGGTACCGAGCTTTTAACGGACACTACCAAGTTGTACAAAGCTGCACTTGGAAACTGCTTCGAAGTTGAAGAGTGGAGTCCGTTTGAGTACTGCATCATGGCGAAACACTTCGAGCGTCAAGGGAAGTCGCCATATGCTTATCATGCGCAATACATGGCACACCTCCTTTCTCTTGGACAACTTGATGGAAATTTCCAGTGCAGCAAACACTCTCAGTGTCTAGTCCTTGGTGAGGGAGTGAAAAACAATGAGGAAGCTAAAGTTTCACGAGAAGAAGCTTTTGAAGAAGGTTTATGCCATATGGTTCAGAAGTTAGTAAACATATTGAAACAAATAGACCCAAAGGATCCTTTCCGGATTGATATGACTGATAAGCTTCTAGAAAAACTTTACAACATGGGTGTGATTCCAACCAGGCAAAGCATTACACTTTGCGAACGCTTAACTATGCGGAGGCTCACGACTGTTTCGGTGCGACTAAAATTTGCAGAGCACTTGAAAAGAGCTGTCACATACATTGAGCAAGGTCATATAAGAGTTGGTCCGGAGTCAGTTACAGACCCAGCTTTCCTTGTTAACTAG 753 0.4449 MRIYEELREIVKIQKFRRFVSYTGFYCFATLISYAYVSNTTRAGYSRADQFYASYPAGTELLTDTTKLYKAALGNCFEVEEWSPFEYCIMAKHFERQGKSPYAYHAQYMAHLLSLGQLDGNFQCSKHSQCLVLGEGVKNNEEAKVSREEAFEEGLCHMVQKLVNILKQIDPKDPFRIDMTDKLLEKLYNMGVIPTRQSITLCERLTMRRLTTVSVRLKFAEHLKRAVTYIEQGHIRVGPESVTDPAFLVN 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00359 250 ProSiteProfiles S4 RNA-binding domain profile. 208 250 - -
Spst1g00359 250 CDD S4 208 250 - -
Spst1g00359 250 PANTHER TRANSMEMBRANE PROTEIN 1 121 - -
Spst1g00359 250 Pfam S4 domain 208 249 IPR002942 GO:0003723
Spst1g00359 250 Pfam Ribosomal protein S4/S9 N-terminal domain 138 197 IPR001912 GO:0019843
Spst1g00359 250 SUPERFAMILY Alpha-L RNA-binding motif 166 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00359 Spst-Chr1 4777141 4783195 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00359 - - var:108344962 233.802