Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00351 ATGGCGGTGACGACATATAATACATCTCTTCCTGCTGCTGAAAGATACATGAATGGGAAAGTTCAGATTACATTGGTTTGGAATTCAAGAAATGAAAATTCACCTGGTTCTGACAAACTGAATGCATTAGCAAATTTTCTATGGAAAAATGGTGGGCCACGGAGTAGGCTTCATTTAATTCACTCTGTGTGGGCCAACTTTCAGACCTCTACTAACAATATAATTTTTGGGAATAGATGGAGACATCTTCTTGGAGAAAGAGATTTCTGGGAACATGTTGGTGGAATTGATGTATCCTTGGCACCGTCTAGTTTTGGCCAGGCAAACACAAGGGCTTTCGATACCTTGCTGCGGAAGTTACAGAAATATGTTCCATATGAATCTTCTGTTGCTGATTTATATGCTGGAGCTGGGGTCATTGGGTTGTCATTAGCCGCCACAAGAAAGTGCAGATCTGTTAAATGCATTGAGATAAACAAAGAGTCGAAGGCATCTTTTGAGAAGACCATTGAACGTTTATCTGCAACTGTTGACAGCAGTATTACTTGGCATCATGCGGATGCTTCAAAAGATCCTTTTTTGTGGCTTGTGGGATCAGATGTTGTTGTCATTGATCCTCCTAGAAAAGGATTAGATGCATCTCTTATTGATGCATTGAAGAATATATCATCAGTCGAGCGTAAAGCCTTGTCATCCTCTGAAAGCACAAACTCATCCCAGGAAGAGAAAAGACCATGGGTTTTACGTGCTAAAGAAGCTTCAGTCCAGATTGGAAACAGACCATCACCAGCTAACATCCCTCAATCAGTGCCACAAACCCTTATTTATATAAGTTGTGGATGGGAAAGTTTTAAAGAGGACTGCAAGTCATTGTTGTCTAGTAAGGCATGGTATTTGGAAAAAGCTCATGGTTTTAATTTCTTTCCTGGTACCCAGAGCATTGAAGTTCTAGCAGTGTTCAAGAGGGGCCCTCAGAAAAAGAAACCAGGAAAGAAAAAGAAAAAGCAGTTGAAAGGAGCAGTCAAACATTAA 1032 0.405 MAVTTYNTSLPAAERYMNGKVQITLVWNSRNENSPGSDKLNALANFLWKNGGPRSRLHLIHSVWANFQTSTNNIIFGNRWRHLLGERDFWEHVGGIDVSLAPSSFGQANTRAFDTLLRKLQKYVPYESSVADLYAGAGVIGLSLAATRKCRSVKCIEINKESKASFEKTIERLSATVDSSITWHHADASKDPFLWLVGSDVVVIDPPRKGLDASLIDALKNISSVERKALSSSESTNSSQEEKRPWVLRAKEASVQIGNRPSPANIPQSVPQTLIYISCGWESFKEDCKSLLSSKAWYLEKAHGFNFFPGTQSIEVLAVFKRGPQKKKPGKKKKKQLKGAVKH 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00351 343 Pfam Conserved hypothetical protein 95 120 244 - -
Spst1g00351 343 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 64 322 IPR029063 -
Spst1g00351 343 MobiDBLite consensus disorder prediction 324 343 - -
Spst1g00351 343 ProSiteProfiles SAM-dependent methyltransferase RNA m(5)U-type domain profile. 1 323 IPR010280 GO:0006396|GO:0008173
Spst1g00351 343 Gene3D Vaccinia Virus protein VP39 252 320 IPR029063 -
Spst1g00351 343 PANTHER BNAA06G32370D PROTEIN 1 328 - -
Spst1g00351 343 CDD AdoMet_MTases 130 225 - -
Spst1g00351 343 Gene3D - 9 105 - -
Spst1g00351 343 Gene3D Vaccinia Virus protein VP39 106 251 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00351 Spst-Chr1 4756718 4761027 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00351 - - gmx:100816889 604.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00351 1 4756718 4761027 Spst1g00351 1 4756718 4761027 ECH