Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00311 ATGGCTCTCAAGGCCGTCCATGTCACCGACGTCCCTTCCCTCGACCTCGTCCCCGAGAACGCCTCTCTCGCCCTCTGCTCCTCCCGCTTCCCCAATGGCGTGGAGATGGGTCGGAGTGGCTTCAAGATGCCGAAGTTCGTCGTCATCGGACACAGGGGTAACGGCATGAACGTTCTGCAATCTTCAGATCGAAGAATGAGAGCCATAAAAGAAAATACCATTATGTCCTTCAACGCCGCCGCCACTTTCCCTCTCGATTACATTGAATTTGATGTTCAGGTGACGAGAGATGAATGCCCGGTCATTTTCCACGACGATTACATTTACTCGGAGGAGAATGGTGCTGTGTTTGGGAAGAGGATCACGGAGCTGAGTCTCTCTGAGTTTCTTTCTTATGGACCTCAAAGAGAGCTTGGGAATGAGGGAAAAGTTTTGCTTAGGAAAAAAGATGGGAAGGTAATGCCATGGAATGTTGAACAAGATGATCCATTGTGCACTCTCCAAGAAGCTTTTGTTAAGGTGGAACCCACTCTGGGCTTTAACATTGAGTTGAAGTTCGATGATCACATTGTCTACGAGCAAGATTATCTCGTGCATGTCCTTCAGACCATCCTAAAGGTTGTTTTTGATTATGCCAAGGATAGGCCTATTATCTTCTCAACATTCCAGCCAGATGCAGCGATGCTCATTAGAAAATTGCAAAGCAACTACCCTGTGTTCTTCTTGACCAATGGAGGATGTGAAATCTATGAAGATGTGAGAAGAAACTCATTAGAGGAGGCAATGAAGCTCTGCGTGGAGAATGGATTGGAAGGAATTGTCTCAGAAATAAAAGGGATATTTAGAAATCCTGGTACAGTAACCAAGATAAAGGAGTCAAAGCTTTGTCTCCTTTCTTATGGCAAATTAAACAATGTTCCAGAGGCAGTTTACATGCAACATCTAATGGGAATTGATGGGGTAATTGTGGACATGGTTAAAGAAATAACTGAGGCAGTGGCAGATATGATAAAGCCAGCAAAGAGTGGTGAAGGAGAGAGTTTGACAGAGGGGAGCGGGAAGGTACAGGGGAACTCAAAGCCACAATTTTCACAGCAGGAGTTGTCTTTCCTTTTAAAGCTCATTCCACAATTGATACAGATTTGA 1146 0.4503 MALKAVHVTDVPSLDLVPENASLALCSSRFPNGVEMGRSGFKMPKFVVIGHRGNGMNVLQSSDRRMRAIKENTIMSFNAAATFPLDYIEFDVQVTRDECPVIFHDDYIYSEENGAVFGKRITELSLSEFLSYGPQRELGNEGKVLLRKKDGKVMPWNVEQDDPLCTLQEAFVKVEPTLGFNIELKFDDHIVYEQDYLVHVLQTILKVVFDYAKDRPIIFSTFQPDAAMLIRKLQSNYPVFFLTNGGCEIYEDVRRNSLEEAMKLCVENGLEGIVSEIKGIFRNPGTVTKIKESKLCLLSYGKLNNVPEAVYMQHLMGIDGVIVDMVKEITEAVADMIKPAKSGEGESLTEGSGKVQGNSKPQFSQQELSFLLKLIPQLIQI 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00311 381 Pfam Glycerophosphoryl diester phosphodiesterase family 51 327 IPR030395 GO:0006629|GO:0008081
Spst1g00311 381 ProSiteProfiles GP-PDE domain profile. 46 333 IPR030395 GO:0006629|GO:0008081
Spst1g00311 381 SUPERFAMILY PLC-like phosphodiesterases 44 327 IPR017946 GO:0006629|GO:0008081
Spst1g00311 381 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 36 337 - -
Spst1g00311 381 Gene3D Phosphatidylinositol (PI) phosphodiesterase 37 335 IPR017946 GO:0006629|GO:0008081
Spst1g00311 381 FunFam Glycerophosphodiester phosphodiesterase GDPD2 37 335 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00311 K18696 - gmx:100781085 694.886