Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00290 ATGGGCGACGGCAAGGTCAATCTCCCCGACGATCTCTTCTCCTCCAAGCCTTCCGATTCCCTCAGAGATGAAGCATCTGGAGGACATGGCGGGGAGAAAGGGACTGCAGCGCTACTTGATGATTCAAAAGATCAATTGTCATCTGACAACAGCATACCCTTATCCCCACAGTGGCTTTATTCCAAACCTGTTGATGCAAGGACAACTGCCAACCCAGTGGGGGTAAACTCAACTGATCCCATTCTGAAAGACAGTTGGCGTTTGGAAGGGTCTCAGGACAAAAAAGACTGGAGGAGGACAGCTCCTGATGTTGACATCAATCGCCGCTGGCGTGAAGAGGAGAGGGAAACAAGCTTGCTTGGGAGAAGGGATCGTAGAAAAGAAGATCGTCGATTGGAGAATACTTCAACCTCAGAGAATAGATCCTTGCCCTCTGATCGCTGGCATGAGACCCGTGGTTCTGGCCATGACTCTCGAAGGGAAAATAAGTGGTCATCAAGATGGGGTCCTGAAGATAAGGAGAAGGATTCTCGAAGTGAGAAAAGAAATGATGTTGAGAAGGAAGATAGTCATGCTGAAAAACAATCTTCTGGTGTTGGCAATCGCATCGGGTCTGACCGTGACACTGATTCTCGAGATAAATGGAGGCCACGACATCGATTGGAAGCTCAAGCTGCTGGTGTGGCTACATACCGTGCTGCACCTGGATTTGGACTGGAGAAAGGACGTACAGAAGGCTCCACTGTGCGATTTTCACCAGGAAGAGGAAGGGCAAACATTAATGGAAGCCCACAAATTGTGAGGCCCCCTATAGGCTCTAGTGTTGGATCTGCATTGGTGGATAGGAGTAAATCCATTTTGGGGAAGTCTAGTCTTGGTGCTGATTCATATTACTACCCAAGGGGTAAGCTCCTTGACATTTATCGCAAGCAAAAGGTTGATCCAAATTTCGATAGCTTGCCTTCTGAGATGGAGCATACATTGCCCTTAACTCAACATGGTTCTGTTGAACCATTAGCATTTATTGCTCCTGCTGATGAGGAAGAGGTTGTCCTTAAAGAAATATGGAAAGGAAAAATTACTAGCAGTGAAGTCTCAGGTTATTCCTTTAGAGGAAGGGAAGGAGGGTCAAATGAGGATATTTCAGGTCCTGGTATTGCAAGTGAGGGAAAACAACAACCTTCCATTGGCAGTGGTGCAAAGGTTATATCAGGAAGTGATGTCTCAGATGATTCTGATCAAATATTAATAGGTACAGGATCAAATGCTGGTGGTTTATTGAGAGACATTGTTGAGGATTTTCAAGAAGGCAAGCCGAAACATTTGCCAACTATTGGTGTGCATGGCAGAGATGAGAGTTCTGTTAGCAGCATTGGAGAGGGAAGCATTCCAGGAAACAAAGTTGCTGAATCAGCCACTTTTGTTCATCAGGGACAATCTGCTGGTGCTCTGGAACATGCTAATCGGAATGGTGTTGACTCAACTGGTGCTTCTGAAATCAATAGCAGTCTACCCGGTGATTCTCGCTCCCTATTTGATTTTTCCTCGTTGCAGCAAACTCCAAGCATTAATCAACAGGACTTCAAAATTAATGAGAAGACATATCTTCCTGAAAGTGTTATTGCTCTTGAGGAGTTGAGTTTGTGCTATCTGGATCCTCAAGGGGAAATTCAAGGACCCTTTCTTGGGATTGACATAATTTTGTGGTTCGAACAAGGATTTTTTGGAATGGACTTGCCTGTTCGCTTGTCAGATGCTCCTGAAGGATCACCATTCCATGAACTTGGTGACATTATGCCTCATTTGAAAGTCAAGTCAGGATTAGGTTCTGGTAGTAATAGGGTTATTCAATCAGAACCCTCTGATGCCATTGGAAGGAACCTAAAAGTAGATGTACATAATTTTGATTATGATGGGTCTTCTGCTAGCGATGATCAACCTTGGTCTTCTTCCCGACCTGATACTACCTCAAGTGTTGGTATTCCTTCTCAAATACCCAATCAAAGTTATCACTCTGAGGTCAAGTTCTCTGACGATCAGTGCTTCAGTAATATTGTTGCACACGATGAGGATATCCATTTGTCAAAATTGGCTGGAAGCATAAATGAAAAACCTTTGATGAGGCCCATGGATGTCAATGCCTTGCATTCTCATCCTGCTGGAAAACCTGTTGCCAATGAAGTTGCATTGAATGATTCTCACAATGAGGCCGATAAGTTGCATCCCTTTGGGTTATTGATGTCTGAACTCAGAGATGGTTCTCATTTAAGGCGTGCACAATCTTCCAATAGTTCTTTGAGATTAGGTGATCAGGGTCATTTTCTGGATCCATCAATGGATAGAGATGCTCCATTTACTGATCAAAGCTCTGTTAGTGGCATGGTTAATCAGCCTTCTTTCAGGGAGACTTGGGCTGATGAATATGGGATAAATAGACATTTTAACCCTAGTCCACATGTAGGTTCATTAGAAGATCACTTCTTGTCACATATGGGACAAAAGTTTAATAATTTTGATGTGACAGATCATCTAATGTTGCAGAAGCTACAGAAAGAAAGGCTTCAGCAGCAGAGTAATATATCTAATCATTTCCCTGCTCATCTTAATGGGTCAGATTTAGAGAGATTTCCAGGTTTTGCGCTTTCTCAGAACAAGAGCTCAAACCTTCAGCAGATGATGCAGAATTCTGGATCAGAGTTTGATCGTATTCTGGAACTTCAGATTCAACGCCAGCTTGAGCTTCAGCAACAGCAAGATATGCATCATCAACAATTACTTCAACAAATGAAACATCAACCCCAGCAACAGTCTCAAGTACAACAATTGCTTCTTGAACAGTTTATGCAGCAGCAGATCCCTGATCCCAGTTTTGGGCAGTCCAAACATGATATTTCTAGGGATAACCTGTTAGATCAGGTACAAATGAGGAGATATATGCATGACTTGCAGCAAAATTCACATTCTTTAAGGCACCTTGATCCATCAATGGAACAGATTATCCAAGCAAATATGGGTCTCAATGCTGCCCAAGGAAGGCAAGCTGATTTGTCAGACCTCTTGTTGCAAGCAAGGCACGGTAATATATTACCTTCTGAACAACATCTTCATTTCCAGCAAGATCAGTTGCAGGCACAGCAGTTATCTTTGGCTCTTAGACAGCAGTTAGGATTAGAAGGAGAAAGGCATTTTGGTAGGTCATGGCCAATTAATGAAACTGGACAGTTGGCTAGAAATCCTGGAACCCATCAACTGGGTCATTCAGCAGGATTTAATGTTTCAGATATTCACAAACAGCAGCAGAGGCTTGTGACACAAGAGGAGCAATTAAATTATTTGGGGAGGAATCTTCCTGAGCAGAACCAGAGAGGGTTCTATGATAATCCTATGATGTTTGAGAGGTCTGCACCTATTTCCCAAGGGAGGGAATTACACGACCGACGCCGCTTTTTACATCCCGGTGATCAAATGGGTTCTTTATCCTCCCATCATCTACAACCATCTGATGATCTTTTTGGTCACCACCCTGATGCTTTCAAGAGTTCGCTCCATGGCAACAATGGGCATGTGGAAAATAGCTGGATTGATCCACGGGTGCAACTACAGCAACATCTTGAAGCTGTGAGGCAGCGAAGAGAGTTAGGAGATACTGTTTCATCAGCAGATCTGAACATGTCTGCATCTGCTGGCTCTCATGAAGATAGTTCAGCTAGAGGTTTTATAGACCTACTTCATCAAAAACTGGGTGTTCCATCTGCACAACCATCAACTCTTGATAAATGGCATCCTCTTTCATCTAGAAGTGACAAATCTTGGAATGTTCCTGAGGCTAGTTCAATAATGCATCCTTTTGAGCTTCAGCCAGATCATCAGCAAGTCCATATTAATGACCATTTTTTAGAAAGGGCTCAAAGTACTAATTCCAGTGCCTTAATCCATGATCATTTATCTAGCATGAATATCACTGACCAATTCAACAATATAGGGAACAATGAAAGAATGCCTCTTCGGTCTAGATCTGGTTCATTACTTGAAGAACAGTCAGTGTTATCTGGGAAAATGGAAACTTTACATCCCAATTACAGAATTCCTTTTCAGATTGGTAAATCATCTATGGAAAAAGACATACTTGAGTTAGAAGCAAATAAGGGTCAGAGACATGAATATATGAGCACAATCAACAATTTAGTTCCTGGGATGTCAGACATGTCAGGGCAAGTGGAAAGCATCATGAATTCCATGGAACTACCAGTAATTGCCCATAGTAGACATAGCTCACTGAGCAGTGCAGGTGGTGATGGTGGCTCATTTGGTCGAGAGATGGTTTTGAACAATTCACGTGGAGATGAGGTTTCTGGTGACAGGATACCTCCTTCAACAAAGGGGTTTGATAATGCTTTTCACAAGCGCCCCCATGTATCTCGGGTTTTATCTTCACCTGATGTACAGTCAGACCAGCCATCCGTTTCCCATGTCAATCAAAATAACTTAATAAGTCTTACATCTAGTGAAGGGAGACGAGAACCATCTGCAAATTCGTCAATGAGTAGCATGACAGATGGTCAGGCTGCTGGGAAAAAGGAGGTTAGGTTTAGATCGTCTTCCTTTAGTGAAGGTGCTGTGTCAGAGACATCATTTATAGACATGCTCAAAAAGCCCGTTCTTTCTGAGGTGGTGGTGGACTCACATGCATCCGCTGGAGTTGGGAACGAGCCATCTGATGCAGCACAAGCAGCACGAGGCGGGAAAAAGAAAGGGAAGAAAGGAAAACAGATAGATCCTTCTCTTCTTGGTTTCAAGGTCTCCAGTAACCGGATCATGATGGGTGAGATTCAACGCCCTGAAGATTGA 4848 0.4325 MGDGKVNLPDDLFSSKPSDSLRDEASGGHGGEKGTAALLDDSKDQLSSDNSIPLSPQWLYSKPVDARTTANPVGVNSTDPILKDSWRLEGSQDKKDWRRTAPDVDINRRWREEERETSLLGRRDRRKEDRRLENTSTSENRSLPSDRWHETRGSGHDSRRENKWSSRWGPEDKEKDSRSEKRNDVEKEDSHAEKQSSGVGNRIGSDRDTDSRDKWRPRHRLEAQAAGVATYRAAPGFGLEKGRTEGSTVRFSPGRGRANINGSPQIVRPPIGSSVGSALVDRSKSILGKSSLGADSYYYPRGKLLDIYRKQKVDPNFDSLPSEMEHTLPLTQHGSVEPLAFIAPADEEEVVLKEIWKGKITSSEVSGYSFRGREGGSNEDISGPGIASEGKQQPSIGSGAKVISGSDVSDDSDQILIGTGSNAGGLLRDIVEDFQEGKPKHLPTIGVHGRDESSVSSIGEGSIPGNKVAESATFVHQGQSAGALEHANRNGVDSTGASEINSSLPGDSRSLFDFSSLQQTPSINQQDFKINEKTYLPESVIALEELSLCYLDPQGEIQGPFLGIDIILWFEQGFFGMDLPVRLSDAPEGSPFHELGDIMPHLKVKSGLGSGSNRVIQSEPSDAIGRNLKVDVHNFDYDGSSASDDQPWSSSRPDTTSSVGIPSQIPNQSYHSEVKFSDDQCFSNIVAHDEDIHLSKLAGSINEKPLMRPMDVNALHSHPAGKPVANEVALNDSHNEADKLHPFGLLMSELRDGSHLRRAQSSNSSLRLGDQGHFLDPSMDRDAPFTDQSSVSGMVNQPSFRETWADEYGINRHFNPSPHVGSLEDHFLSHMGQKFNNFDVTDHLMLQKLQKERLQQQSNISNHFPAHLNGSDLERFPGFALSQNKSSNLQQMMQNSGSEFDRILELQIQRQLELQQQQDMHHQQLLQQMKHQPQQQSQVQQLLLEQFMQQQIPDPSFGQSKHDISRDNLLDQVQMRRYMHDLQQNSHSLRHLDPSMEQIIQANMGLNAAQGRQADLSDLLLQARHGNILPSEQHLHFQQDQLQAQQLSLALRQQLGLEGERHFGRSWPINETGQLARNPGTHQLGHSAGFNVSDIHKQQQRLVTQEEQLNYLGRNLPEQNQRGFYDNPMMFERSAPISQGRELHDRRRFLHPGDQMGSLSSHHLQPSDDLFGHHPDAFKSSLHGNNGHVENSWIDPRVQLQQHLEAVRQRRELGDTVSSADLNMSASAGSHEDSSARGFIDLLHQKLGVPSAQPSTLDKWHPLSSRSDKSWNVPEASSIMHPFELQPDHQQVHINDHFLERAQSTNSSALIHDHLSSMNITDQFNNIGNNERMPLRSRSGSLLEEQSVLSGKMETLHPNYRIPFQIGKSSMEKDILELEANKGQRHEYMSTINNLVPGMSDMSGQVESIMNSMELPVIAHSRHSSLSSAGGDGGSFGREMVLNNSRGDEVSGDRIPPSTKGFDNAFHKRPHVSRVLSSPDVQSDQPSVSHVNQNNLISLTSSEGRREPSANSSMSSMTDGQAAGKKEVRFRSSSFSEGAVSETSFIDMLKKPVLSEVVVDSHASAGVGNEPSDAAQAARGGKKKGKKGKQIDPSLLGFKVSSNRIMMGEIQRPED 1615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00290 1615 MobiDBLite consensus disorder prediction 238 269 - -
Spst1g00290 1615 SUPERFAMILY GYF domain 540 602 IPR035445 -
Spst1g00290 1615 MobiDBLite consensus disorder prediction 41 57 - -
Spst1g00290 1615 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1615 - -
Spst1g00290 1615 MobiDBLite consensus disorder prediction 1 219 - -
Spst1g00290 1615 CDD GYF 545 603 IPR003169 GO:0005515
Spst1g00290 1615 SMART gyf_5 546 601 IPR003169 GO:0005515
Spst1g00290 1615 MobiDBLite consensus disorder prediction 143 195 - -
Spst1g00290 1615 MobiDBLite consensus disorder prediction 479 502 - -
Spst1g00290 1615 MobiDBLite consensus disorder prediction 205 219 - -
Spst1g00290 1615 MobiDBLite consensus disorder prediction 1445 1532 - -
Spst1g00290 1615 MobiDBLite consensus disorder prediction 1476 1520 - -
Spst1g00290 1615 MobiDBLite consensus disorder prediction 639 663 - -
Spst1g00290 1615 MobiDBLite consensus disorder prediction 86 136 - -
Spst1g00290 1615 Pfam GYF domain 550 594 IPR003169 GO:0005515
Spst1g00290 1615 MobiDBLite consensus disorder prediction 388 416 - -
Spst1g00290 1615 ProSiteProfiles GYF domain profile. 545 596 IPR003169 GO:0005515
Spst1g00290 1615 MobiDBLite consensus disorder prediction 367 416 - -
Spst1g00290 1615 MobiDBLite consensus disorder prediction 1564 1595 - -
Spst1g00290 1615 Gene3D - 537 613 IPR035445 -
Spst1g00290 1615 MobiDBLite consensus disorder prediction 439 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00290 Spst-Chr1 4057736 4065340 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00290 K18730 - gmx:100810477 2694.07