Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00255 ATGGAGGATAGTTTCAGAGTGCGAGTGGAGAGAGCCTTTGGTTCGCTTCCAATGCCCTCTTCTTCTCTCAACTCTCTATGGTCTCTCACCCAAGACGAAATCGATGACGCGCCCTCCAATCGCACCCCCCAACCCAAACCCGAACCTGAACCCGAACCCTACTACTCTTCTTCCAGTTCACGGGTTAAGCTGGAGGACCTCGACGATCTCGACGACGAGGACGACGAAGAAGAAGCGCCACGTGGACCCTCTAAACCCCCCGATTACGATGATGAACAGTGGCAGATTAGGTCTGGTATTGGCCAAGATTGCACCCTCGATTACGAGGAAGAGGAAGATCAATATGACAAACAGGCTATTGGCAAAGAGAATTTGGGTGATCGTGTGTACATGAGGGATATAAAGGATGATGGAGTTGAGATTAGTTCTAGCAGTGTTTTCCCCAATTCGTTCAGAGATTTCGTGCGAGATCCACGTGCAAATCATTTGGCTGCGAGGATTAGGCTGAAGCAGGATGATGAAGCAGCTAAGAAAATTGATGCTCTGCATGTCTCTGAGAAATCCGCACCAGACATAGGTGGTGGCGGAGATGCTACTAACCTCAAGTCAATTTTGAAGAGTAAGGATAATACGTCAGAGCCCAGGCCCCATAAACGTGTTCGGTTTGATCCTGAATGTGATGATAAAGATAACGAAGATGATGAAGGACACGTAGACACCAGGGGTGTTCGCATGAAGACATCTACAATGGAAGAGGTTCCAGCTTCTGATCAATTGTCTAAGTCACAAGAATTTGATTCAGCAGTTCCCGATTACGTTCGGAACCCTTCAAGATACACACGATACACCTTTGATGATTCTCCAAGTGACATGGATGACAAATCAAATACGGAAGCATACATGAGCTTCCTATCGCAGTTGAACAAGGGAACTGCATCTCATGCAGATGAGGCTTTGGATGATCTTCCATCTGTAACCTTTATATCAAAGAAGAAATCCGGTGATGCCAATATGCGTGACAGTGAGATGGTTTCAAAGCAAAAGCTTGATGCTGGCATGGAGGCCATGAATAGAAGAGCCTTCCCTGTTGGCATAGCTGCTGGTGACTCTGAAAACAGTGACGTTTGTGCAATGGAGGAAGATGAACCAGAAATTGAGGATGTTAAGAAGAGCTCTCAGAAGTTGAACCGCAAATACAGGAAGAAAACCCAAGAGGAGTTGAAGGAGCCTATTGTGTAA 1239 0.4641 MEDSFRVRVERAFGSLPMPSSSLNSLWSLTQDEIDDAPSNRTPQPKPEPEPEPYYSSSSSRVKLEDLDDLDDEDDEEEAPRGPSKPPDYDDEQWQIRSGIGQDCTLDYEEEEDQYDKQAIGKENLGDRVYMRDIKDDGVEISSSSVFPNSFRDFVRDPRANHLAARIRLKQDDEAAKKIDALHVSEKSAPDIGGGGDATNLKSILKSKDNTSEPRPHKRVRFDPECDDKDNEDDEGHVDTRGVRMKTSTMEEVPASDQLSKSQEFDSAVPDYVRNPSRYTRYTFDDSPSDMDDKSNTEAYMSFLSQLNKGTASHADEALDDLPSVTFISKKKSGDANMRDSEMVSKQKLDAGMEAMNRRAFPVGIAAGDSENSDVCAMEEDEPEIEDVKKSSQKLNRKYRKKTQEELKEPIV 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00255 412 MobiDBLite consensus disorder prediction 371 412 - -
Spst1g00255 412 MobiDBLite consensus disorder prediction 11 123 - -
Spst1g00255 412 Coils Coil 385 405 - -
Spst1g00255 412 MobiDBLite consensus disorder prediction 17 38 - -
Spst1g00255 412 MobiDBLite consensus disorder prediction 208 226 - -
Spst1g00255 412 Pfam Tumour suppressing sub-chromosomal transferable candidate 4 260 312 IPR029338 -
Spst1g00255 412 MobiDBLite consensus disorder prediction 187 272 - -
Spst1g00255 412 MobiDBLite consensus disorder prediction 383 412 - -
Spst1g00255 412 PANTHER TUMOR SUPPRESSING SUBTRANSFERABLE CANDIDATE 4 TSSC4 1 406 IPR029338 -
Spst1g00255 412 MobiDBLite consensus disorder prediction 251 265 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00255 - - vra:106753667 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00255 1 3523798 3526006 Spst1g00255 1 3523798 3526006 ECH