Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00238 ATGTGGTTTTTGTGGTCTTTTTCCGATCCCAGAAACCCTTCCATCTTCCGCCGTTCGCCGTTCAAGTGCCGTCGTCGGTTCCGCTCAGCCACTCTCTCAATTCACCGTTCAATCGTTGCAAAGGTGCAGGTTCAGGTTCCCTTGGAATCCATGGCTGTTTCATATTTTCATATAGTTCAATCTGGCAGGGGTTTCCACAAGGGTAATCTCTCCTATGCCAATTGCAGTTCCAAGGGGAGAAGGACCCACCGTTTAGTTTTTGCTTCTATACACACGTCAGACCCTAAGGTAGATTCATTACTGGACAGTGTGAAATGGGATAACAAAGGCTTAGCTGTGGCAATAGCTCAGAATGTTGACACAGGAGCCATATTAATGCAAGGTTTTGCAAACAGAGAAGCAGTGGCTACAACCCTATCTTCTCGAAAGGCCACATTCTATAGCCGATCACGATCTACATTGTGGACCAAAGGAGAGACCTCGAATAATTTTATCAATGTCCATGATGTCTTTCTTGACTGTGATCGTGACTCTATAATATACCTGGGGAAACCTGATGGGCCTACCTGCCACACAGGGGCAGAAACATGCTATTATACATCAGTCTTTGACTTGTTAAAACAGAAAGAGGATGAAGGAAATAAATTGGCATTAACCTCTTTGTATGCATTAGAGTCAACAATCTCGCAACGGAAAACAGAGTTAACAGGAGAAAATGAGAAGCCTTCATGGACGAAGCGATTATTGCTTAATGATCAGTTGCTATGTTCTAAAATCAGGGAAGAGGCAAATGAGCTGTGTCAAACACTAGAGAATAATGAGGACAAATCACGTACTGCTTCAGAGATGGCTGATGTACTCTATCATGCCATGGTTCTGTTGGCACAGAAAGATGTCAAAATAGAAGATGTTTTGCAGGTTCTTCGGCTGAGATTTTCCCAATCTGGTATTGAGGAGAAGAGAAGTCGTGTATCCCAGAAACCATCGGATCATTGA 996 0.4347 MWFLWSFSDPRNPSIFRRSPFKCRRRFRSATLSIHRSIVAKVQVQVPLESMAVSYFHIVQSGRGFHKGNLSYANCSSKGRRTHRLVFASIHTSDPKVDSLLDSVKWDNKGLAVAIAQNVDTGAILMQGFANREAVATTLSSRKATFYSRSRSTLWTKGETSNNFINVHDVFLDCDRDSIIYLGKPDGPTCHTGAETCYYTSVFDLLKQKEDEGNKLALTSLYALESTISQRKTELTGENEKPSWTKRLLLNDQLLCSKIREEANELCQTLENNEDKSRTASEMADVLYHAMVLLAQKDVKIEDVLQVLRLRFSQSGIEEKRSRVSQKPSDH 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00238 331 Gene3D - 94 190 IPR038019 -
Spst1g00238 331 Pfam Phosphoribosyl-ATP pyrophosphohydrolase 225 308 IPR021130 -
Spst1g00238 331 Gene3D - 218 313 - -
Spst1g00238 331 PANTHER HISTIDINE BIOSYNTHESIS BIFUNCTIONAL PROTEIN 90 323 - -
Spst1g00238 331 Coils Coil 256 280 - -
Spst1g00238 331 Pfam Phosphoribosyl-AMP cyclohydrolase 126 199 IPR002496 GO:0000105|GO:0004635
Spst1g00238 331 NCBIfam phosphoribosyl-ATP diphosphatase 221 308 IPR008179 GO:0000105|GO:0004636
Spst1g00238 331 SUPERFAMILY all-alpha NTP pyrophosphatases 222 312 - -
Spst1g00238 331 SUPERFAMILY HisI-like 101 203 IPR038019 -
Spst1g00238 331 Hamap Histidine biosynthesis bifunctional protein HisIE [hisI]. 102 313 IPR023019 GO:0000105|GO:0004635|GO:0004636
Spst1g00238 331 FunFam Histidine biosynthesis bifunctional protein HisIE 96 190 - -
Spst1g00238 331 CDD NTP-PPase_HisIE_like 221 308 IPR008179 GO:0000105|GO:0004636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00238 K11755 - gmx:100807276 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00238 1 3296903 3300637 Spst1g00238 1 3296903 3300637 ECH