Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01450 ATGGATGCAACTAGCACAGATCCTTCTTCCTTCACGCTTCTAGCGTCGTCTCCTTCTGGTCTTTCACCATCACAGGTTTCCGTGGCGTTCAGCGACGCCTACGACCGCATCGCTCACTCTGACGTCAATTTGGAGAACACGATTTTCGAGATATGGGATCAGAGGAGTCAGAAGAACAATTCACTGTTCAATGGGAAGAAGTTTAGGTATGGAGGCTGTGCTTTGGACGCAGGAAATGGATCCGACCGTGAACCACATTTATGCCTCCACCTAGGTTTGACAGATTATAGGCTAATTGGACAAAGAAGCTTAAAAAATGAGATCATTGTGATGCTTAATTTTCGGCAAGCCATATGGACTTTTGTGGGGACAAACTTAAGTCCTTTGTGGGAAAAGTTCCTGGTTCCATCGGAAGATGATTCTGTTCTTTGTCAGCACACCTCCAGCCCGCTAGGAAATGGTGCAGTGGTGGAAACAATTGACAATAAAATACTAGTATTACAACGAAGTACTAATGTTGGTGAATTTCCTGGACATTTTGTTTTCCCTGGAGGCCATCCTGAGCCTCAAGAAATTGGTATAACATCTCATCAATATGTCAAGGAGTTAGCAGAATCTATTAACGTAAAGGTTTCAAAGGAGATGTTTGATAGCATAGTTCGTGAAGTAGTTGAAGAAATTGGAGTGCCACCTTCATCCCTTAGCACCCCCACTTTCATTGGTATATCTCGCAGGAATTTGAATGTGAGACCGACTGCATTTTTCTTTATCAAATGTAGTCTTGATTCACAGGAAGTTCAGCAGTTTTATTCTAGCGCACAAGATGGCTATGAATCGACTCAGCTCTATGCTGTTCCAATGATTGAAGTAGAAAACATGGCTTCTAGGATGCCTGGCTGTCATCGAGGTGGATTTGCTCTCTATAAACTAATGGTTGACACCAGAAAGATTAATTAA 957 0.4263 MDATSTDPSSFTLLASSPSGLSPSQVSVAFSDAYDRIAHSDVNLENTIFEIWDQRSQKNNSLFNGKKFRYGGCALDAGNGSDREPHLCLHLGLTDYRLIGQRSLKNEIIVMLNFRQAIWTFVGTNLSPLWEKFLVPSEDDSVLCQHTSSPLGNGAVVETIDNKILVLQRSTNVGEFPGHFVFPGGHPEPQEIGITSHQYVKELAESINVKVSKEMFDSIVREVVEEIGVPPSSLSTPTFIGISRRNLNVRPTAFFFIKCSLDSQEVQQFYSSAQDGYESTQLYAVPMIEVENMASRMPGCHRGGFALYKLMVDTRKIN 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01450 318 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 147 300 - -
Spst11g01450 318 SUPERFAMILY Nudix 151 248 IPR015797 -
Spst11g01450 318 FunFam Nudix hydrolase 9 149 300 - -
Spst11g01450 318 Pfam NUDIX domain 157 250 IPR000086 -
Spst11g01450 318 ProSiteProfiles Nudix hydrolase domain profile. 148 313 IPR000086 -
Spst11g01450 318 PANTHER URIDINE DIPHOSPHATE GLUCOSE PYROPHOSPHATASE 120 315 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01450 - - vra:106755683 518.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01450 11 38940483 38949032 Spst11g01450 11 38940483 38949032 ECH