Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01448 ATGGATGACGAACTGCTAGAGCTGCAGCGACAATTCGAGTTCGCGCAGCAAGCCAAGTCGAGCATTCGATTATCGGAGCGAAACGTCGTGGAATTGGTCCAGAAATTGCAGCACCTCCAAATCATCGATTTCGAGCTTCTCCACACTGTCTCCGGCAAAGAGTACATCACTCTTGATCAATTGAGGAATGAAATGGTGGCGGAGGTGAAGAGACAAGGGCGCGTTTCTTTGATTGATCTCGCTGACGCTACTGGAGTTGACTTATACTACGTGGAGAAGCAGGCGCAGAGCGTTATATCGGAATACCGAGAACTGATGTTGACTCAGGGAGAAATCATGTCTGAGTCCTATTGGGACTCAATCGCGGAAGAGATTAACGAGAGGCTTCAGGAGTGTAGTCAGATTGCGCTGACGGAACTCGCGGCGCAATTGAACGTAGGTTTGGACTTGGTTGCCTCCGTGTTGGAGCCGCGCCTTGGAACAATTGTGAAAGGAAGGCTTGAAGGTGGGCAGCTGTACACCCCTGCCTATGTGGCTCGTGTTGGTGCCATGGTTCGGGGCGCTGCGCGGGGAACCACTGTTCCGACGAATTTGACTGTGGTATGGAGCTCGTTGCAGCAGTTACTGCAAGAAATTGATGGAACCAGCGGTTTGGCTGTCGAAGGATCTTTCTTCCAGTCATTGTTTAACGGACTTGTGAAGGAAGGCGAGGTTCTAGGATCACTTCGTGCAGGAGTACATTGGACACCAGCTGTATTTGTCATTGCTCAAAGGGAGTTTGTGGAGTCATTTTTTTCTCAGAATTCTTTTGTCACCTATGAGGCGCTGCACAAACTTGGAATTCCCCAGCCCATTCAATTCTTGCAGTCCAGATATCCTGAAGGCAAACCTCTAGTTACAACGTTTGTTCATCCATCTATGATTGATATGCTAGATGCTGCTACTGAGGATGCTCTTGACCGTGGTAGCTGGAGTGATTCTCTATCCTTATTACCTTCATCTTTTACACCTCAAGATGCTTCTAAAATGTTGTCCCTCTGTCAGTCTGTGCAAAATGCTCTTAAGTCTAACAAAGCACACATTTTTGGGGATTTTTATGTGCTGAGCAGCAGTTTTATAAAGGACATCTGTGATCGTATTGTGAAAGAGTTGGAGACATTAGGTGTTTCAGTGTCTGCTGGCTATACGATGCATGGTGAAGTTCAAGTACCCAGTGAAGCTAAAGTAGGGCATGAGTCAAGCAGGTTGAATGAGTCCATTGAGATGGCAAGTGATGGTGGTGCCAACAGGCAAGCTGATAAAGGATCAAGGAAGAAAAAGGGGAAAGCCACAGGGAATACAGTAGTAAATCCATCTGAAAGTGGTGCAGAAAACCAGGAACCGACTTTGTCAAAATCTAAGAGAGGCCAGAAAAGGGGTAAGGACACATCTGCTCAAACTTCAGATTCAAAGATGGGTTCTAGGAAGGAATCGGTTAAAATGAAAGAGGAAAATCTCAGTCCGTCAGAAGAATGGATCATGCAGAAAATTACAGCATTGGTTTCTGATTTTGAAGAACAAGGTGTAGATGATCCTGAAATAATTCTTAGGCCTTTGGCTAACCAATTAAGGCCTACAATAATCAATTCTTGGATGGAGAAAAAGAAGGCACTGCATACAAACAATGCAGAAAGAATGAAACAATTGCTTGATAATTTGCAGAAGAAACTGGATGAGTCTTTCTTAAACATGCAGCTTTATGAAAAAGCCTTAGAATTGTTTGAAGATGATCAATCAACTTCTGTTGTTCTGCACAGGCATTTACTAAGGACAGTAGCAGCTCCTATGGTGGATCTGCTTCTTCATAACCTGGAAGAGCACAACAAATTAAAAAATGGACTTGACGTGCAGGAAGCTTCTGATTCCGAATCTGTTTCACTTTGTCCTGCAGATAGAACTGCAATTTCAAAGAGTTTTCCAGGAGCTCTTGCAAAAAAGGCTTTTGCTGTTGTTGAATCATTGGAAGGAAAGAGTGTGGAGTCCTTCATGGCTGCCTTTAGAATGGTTACAGAAGAGAGTGGGCTGCCTTTGAAAAAGCTTGACAAGAAACTAGAAAGAACACTCTTACATTCATATCGTAAGGAATTGACATCTCATGTTTCTGCTGAAACTGACCCTGTATCACTTCTGGCGAAAGTTGTGTCTTTACTTTATATCCAGGTTTACCACAAAGCTCTTCAAGCTCCTGGAAGGGCCATATCCGTGGCTATTTCCCATTTAAAGGATAAGCTAGACGAGTCGGCATTCAAGATTTTAACTGATTATCAAACTGCCACAGTGACTCTTTTGACACTATTAGCAGCTTCACCTGGTGATGAGGAGCATTGTGCATCTGATAGGATTTTGAGTAAAAGGGAGCTTCTAGAGAGTCAAATGCTGGAACTCAAAAGCTTGGTTTTGAGCACCTCTCAATCCTCATAA 2460 0.4402 MDDELLELQRQFEFAQQAKSSIRLSERNVVELVQKLQHLQIIDFELLHTVSGKEYITLDQLRNEMVAEVKRQGRVSLIDLADATGVDLYYVEKQAQSVISEYRELMLTQGEIMSESYWDSIAEEINERLQECSQIALTELAAQLNVGLDLVASVLEPRLGTIVKGRLEGGQLYTPAYVARVGAMVRGAARGTTVPTNLTVVWSSLQQLLQEIDGTSGLAVEGSFFQSLFNGLVKEGEVLGSLRAGVHWTPAVFVIAQREFVESFFSQNSFVTYEALHKLGIPQPIQFLQSRYPEGKPLVTTFVHPSMIDMLDAATEDALDRGSWSDSLSLLPSSFTPQDASKMLSLCQSVQNALKSNKAHIFGDFYVLSSSFIKDICDRIVKELETLGVSVSAGYTMHGEVQVPSEAKVGHESSRLNESIEMASDGGANRQADKGSRKKKGKATGNTVVNPSESGAENQEPTLSKSKRGQKRGKDTSAQTSDSKMGSRKESVKMKEENLSPSEEWIMQKITALVSDFEEQGVDDPEIILRPLANQLRPTIINSWMEKKKALHTNNAERMKQLLDNLQKKLDESFLNMQLYEKALELFEDDQSTSVVLHRHLLRTVAAPMVDLLLHNLEEHNKLKNGLDVQEASDSESVSLCPADRTAISKSFPGALAKKAFAVVESLEGKSVESFMAAFRMVTEESGLPLKKLDKKLERTLLHSYRKELTSHVSAETDPVSLLAKVVSLLYIQVYHKALQAPGRAISVAISHLKDKLDESAFKILTDYQTATVTLLTLLAASPGDEEHCASDRILSKRELLESQMLELKSLVLSTSQSS 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01448 819 MobiDBLite consensus disorder prediction 486 500 - -
Spst11g01448 819 PANTHER E3 UFM1-PROTEIN LIGASE 1 2 818 IPR018611 GO:0061666|GO:0071569
Spst11g01448 819 MobiDBLite consensus disorder prediction 443 463 - -
Spst11g01448 819 Coils Coil 549 583 - -
Spst11g01448 819 Pfam E3 UFM1-protein ligase 1 4 288 IPR018611 GO:0061666|GO:0071569
Spst11g01448 819 MobiDBLite consensus disorder prediction 420 500 - -
Spst11g01448 819 MobiDBLite consensus disorder prediction 464 478 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01448 1 785 EF-hand Containing Proteins AT3G46220 62.008 0.0 950
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01448 K22755 - gmx:100808087 1375.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01448 11 38913267 38922385 Spst11g01448 11 38913267 38922385 ECH