Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01440 ATGCAGCACGGCGCGCCGGACAGAGAGTTCGGAGGGAGCATTAGACTCCTCTGTTCTTCGGTGCCTTCTCATACGCTCTTCTCAGCAAAACTAGAAGAGATGAATAGGGGGAGAACTGAGGGCATAACCTTTACTAAGGAACCGTTTATGGAGGATGCGGGGCCTCGTAAGATAAAGAACATGAAGTTCTCCATGTTATCAGAATCGGAAATAAGCAAACTTGGTGAAGTTCAAGTGTGGAAAGGTTCCTACTATGATTCCTTTAAGAAGCCTATTCATGGTGGCTTGTTGGATCCTCGCATGGAATCCTACGTATTAGGATACTTAAACCTCGCCCTTCCTGTTCTCAATGTTGGATGTTTAGGTATCATTGTGGAAATACTGAAGTGCATTTGTAAGGATGCACATCTAAATATAGATGCTAATATTGTAAAAGAATCAATTTTACAAATTAAGAAGACGAAACTGAAGCCAGAGCACATAAAGATTTTAGATATTAAAAAGCTTCGAGTTGTTCCCCAAGATGCTGATAGAAGCAAATTGCATTTTCAACTTCACTATCTCAAAAATTTGCTTCCAACACTTGTAGTAAAGGGAATTAAAACTGCTGATCGAGTTGTTATCAGCAAAGAAGATAAAACCACCAAGGCTGAAAAGTTCAAATTACTGCTAGAAGGGTTAGTTCATCCTGTTCTTCTTTATGACTCATGGTCCTTCAATCCTATTTATATAGATGTTTGGATGCATATTATATGCCTTTTTGAGGATTGTTTAATTGGGTGGAAAATTGAATTGAGAGGGTTTGAAAGGGCCTTAGGCTGGTGCTATGCCAGTGGCACTGCTCATCTACCTGACAGGTTGGATCTTCCGGAGTTGCCTCATGGAGCCCAGTCCTTCTTTGCTTTGAGATGCATGCATGAAATGAGATTTCCTGGCGTCCAAATGATCTTTAGCCATCAACATAGAGCTGAAGCACAACTGAAGGGGAAGGAAGCATTGGTTTCAACCAAGTATTAA 1017 0.4081 MQHGAPDREFGGSIRLLCSSVPSHTLFSAKLEEMNRGRTEGITFTKEPFMEDAGPRKIKNMKFSMLSESEISKLGEVQVWKGSYYDSFKKPIHGGLLDPRMESYVLGYLNLALPVLNVGCLGIIVEILKCICKDAHLNIDANIVKESILQIKKTKLKPEHIKILDIKKLRVVPQDADRSKLHFQLHYLKNLLPTLVVKGIKTADRVVISKEDKTTKAEKFKLLLEGLVHPVLLYDSWSFNPIYIDVWMHIICLFEDCLIGWKIELRGFERALGWCYASGTAHLPDRLDLPELPHGAQSFFALRCMHEMRFPGVQMIFSHQHRAEAQLKGKEALVSTKY 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01440 338 Gene3D RNA polymerase II, clamp domain 48 104 IPR044893 -
Spst11g01440 338 SUPERFAMILY beta and beta-prime subunits of DNA dependent RNA-polymerase 57 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01440 Spst-Chr11 38831205 38838751 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01440 K03018 - gmx:100811292 173.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01440 11 38831205 38838751 Spst11g01440 11 38831205 38838751 ECH