Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01406 ATGTCGGCACGGCAGATATTTCTCTGCACTCTCTCCCACGCTCTACCTCTATCTTCCTCTCTTACCTTCAAATCTAGAACATTCCTCTTCCTTCCCTTCGTACACACTTACCGCACTCTAACTCCCTCGCTCTCATCAATGCCTCGCAATCAGCGAAGTGGCGCGAACGTGGAACGGAGATGGAAATTGAAAGCGAAAACCGGGGCGCAGTTGTCCGCTAAGGGAGACGCCGCTGCAACTGCTGAGGAAACTGTTACTAATAAGCTTGCTGGATTGAGTATTGGTGAAAACAGTGGGAAAACCGGTGCGCAAGGTGCGGTTTGGAAACCTAAGTCTTATGGAACTGCGAGTGGAGGCACTGTTACCGAAGTTGAGAATGGAACAGCAATTGAGGCAAGTGTAGCTTCGACACAAAAGAGTGGTGGAAATGGTCTAAGTAAGATATTTCGCGGTAATCTGTTAGAGAAATTCACTGTGGACAACTCCACGTACACACGTGCACAAGTCAGAGCGACTTTCTATCCCAAATTTGAAAATGAAAAGTCGGATCAAGAGGTCCGGACAAGAATGATTGAGTTGGTAGCAAAAGGGTTGGCTACCTTAGAGGTTTCCCTTAAACACTCTGGTTCTCTTTTTATGTATGCGGGTCATGAGGGTGGAGCTTATGCGAAAAACAGTTTCGGAAATATATATACTGCTGTTGGTGTATTTGTTCTTGGACGGATGTTTTGTGAGGCTTGGGGAGCTGAAGCTTCAAAAAAACAGGCTGAGTTTAATAATTTTCTTGAGAGAAACCGGTTGTGCATATCAATGGAACTAGTAACTGCTGTTCTTGGAGACCATGGACAGCGTCCCCTAGAAGATTATGCGGTAGTCACGGCTGTTGCTGAACTGGGAAATGGAAAGCCAAAGTTCTATTCAACTCCTGAGATAATAGCTTTCTGTCGAAAATGGCGCCTTCCAACAAATCATGTGTGGTTGTTTTCAACAAGAAAATCAGCCGCATCTTTCTTTATTGCCTATGATGCCTTATGTGAGGAGGGGACTGCAACGTCTGTATGCAAGGCTCTTGATGAAATTGCAGACATCTCTGTACCAGACAACCAATATCCTTCTGAAGACAACTCCTGGTGGTTTGTAGTTTTTGCGTTCGTCTTGTTTCAGTTTCAGTCTGCTGTGTTTTGTTCGAAAGACCATGTAAAAGCCCAAGGTGAAATTTTAGAGGGTCTTGTGGCTCGTCTTGTAAGTCATGACAGTTCAAACCATATAGAGAAAACTTTGAAAGAATTTCCTCCTCCAGCTGCTGATGGAGTGGCCCTTGATTTTGGACCAAGTCTAAGGGAAATATGTGCAGCAAATAGATCTGATGAAAAACAGTGGGACCTTGTGAAGCAGGATATATGGGTTCCCCCCTCCCTCTGTTCAGGGTGTTGTCAAATAAAAGCACTTCTCAAGAGTGTTGGTAGTTCTTTTTGTCCTGGCTACTCAGATTGGTTTGGGACTGATGGTGCTGATTATCATTCAAGAAATGTGGACAGATCTGTTCTTTCAAAGTTTTTACAAGCCCATCCTGCAGACTATTCAACGAAAAAGTTGCAGGAAGTTGTTCGGTTGATGAGGGAAAAACGTTACCCTGCTGCATTCAAATGTTATCATAACTTCCACAAGGTTGATGCCATGTCAAGTGAGAATATTTTCTATAAAATGGTTATTCATGTACACAGTGATTCTGGTTTTCAGCGATACCAAAAGGATATGAGGCTTAAACCAGGATTATGGCCATTGTATCGAGGTTTTTTTGTTGATATAAATTTATTTAAGGCAAATAAGGAGATGGCCGCCGAAATTTGTAAGAACAGTGTAAATGAAACTGGTAACTACAGCTCTGGGGAAGATGACTTTGCTAATGAAGATGCAAATTTAATGGTCAAATTGAAATTTCTTACATATAAGTTGCGAACCTTTCTCATTCGGAATGGTCTGTCAAATCTGTTCAAAGAAGGTCCAGGTGCTTACAAGGCTTATTACCTAAGTCAAAAGTTTCACAGTCGAGGTCAAGGATCTCAGCAGCACTGTGAAAGAGATCCTTGGGACTTGCATGCTGTTCATGGAGATGTTGAGGATCTTCTTAATTCATATGTTAAGTTACAACAAATGAAAAAATGGGGGACCTCTCCAGAAAAGCAGAGAGAACTTAGCAAGATGCTTGATGAATGGGCTGTGTATATAAGAAGGAAGTGTGGGAATAAACAACTGTCATCATCAACCTATCTGAGCGAAGCCGAACCTTTTCTTGAAGAGTTTGCAAAACGTAGTCCACAGAACCAAGTTCTGATAGGTTCTGCTGGTAATTTAGTCAGAACTGAAGATTTCATGGCTATTGTCAAGGAAGGCCAGGATGAAGAAGGTGATCTTGTGGCAGAGCGGAAGATAGCACTGCCAGGGCCTAATATCTCAGTCAAAGACAGTGTTCCAAAATATGAAGGGTTGATTGTATTCTTTCCTGGAATACCTGGTTGTGCTAAGTCCACCCTTTGCAAAGAATTGCTAAATGCCGAAGGAGGACTAGGAGATGATCGACCAGTTCACAGTCTCATGGGTGATCTGATTAAAGGAAAATATTGGAAGAATGTGGCTGAAGAATTCAGAAAGAAACCAAATTCGATAATACTTGCTGACAAGAATGCCCCAAATGAAGAAGTTTGGAAACTGGGGAAAGCGAGTGGGATTGGCTGGAGTACCATTGGGTTGGCAAAAATAGCTGAGTCTGTCTATGAAAGATGTTGGCCAGAAGAACTGGACATTGTTAAACCCAATTTCCAGGTGCCAGGTGAGAGCATGCTGCTGCAAGGGATATGCAGTGTTACTTTTGCTTTTGACTTGATAGAAGATATGTGTCGCAAAACCAGAGCATCTGCTATACCGGTTGTACCTGAATCTGAAGGAACTCATACAAATCCATTTTCTCTTGATGCATTAGCTGTTTTTATGTTCCGTGTGCTTCAGCGAGTCAATCATCCGGGAAATCTTGACAAAGCATCTCCAAATGCTGGCTTTGTGTTGCTAATGTTTTATCATCTTTATGATGGCAGGAGCCGTATAGATTTTGAGTTTGAATTGATTCAGCGCTTTGGGTCACTTGTCAAGATACCACTACTAAAATCTGATAGGACTGCCCTTCCTGGGCCAGTGCAGTCCATTTTGAAGGAGGGAATTAATTTATATAGAAATCACGCACTCACACCTGGAAGATTAGATTCTACCAAAGGATATTACGAAAAAGAATGGATAAAATGGGAGAAACAGTTACGGGATATTCTTTGCGAAAATGCTGAGTATTTTAATTCTATTCAGGTTCCATTTGAGTTTGCTGTCAAGCAAGTGTTGGAACAAATGAGAAACATTGTTAAACGAGATTACACACCACCAAATACTGAAAAGAGGAAACTTGGTACCATTGTTTTTGCTGCTCTCAGCATGCCTGTTACTGAAATTAAAGGCGTCCTCAATAAATTGGCCGACAGTAATCCCAAGATTGACGTATTCCTTAAAGACAAAGATTTCGAGAATCTTAATCGAGCTCATTTGACTCTTGCCCACATGAGAAGTCATGGCATCAAAGCCGTAGCTGATTATGGTATCCATCTTAATAAAAAGGTTCCAGTGGAATTGAGAGCACTGCTCTTCTCAAATAAAATGGCCGCATTTGAAGCTTGTCCCGGCTCAGTGGAAGGTGAGAAGGTAGTTTCAAAAAATCCGTGGCCTCATATAACCTTGTGGACTGCTGAAGGTGTTGCACCCAAGGAGGCCAACATGTTACCAGAGTTGTTTGCAGAGGGGAAAGCAAATCGAATTGACTTCAATCCTCCCATCATTTTGTCTGGCACTGTTGGCTTTTATTGA 3903 0.422 MSARQIFLCTLSHALPLSSSLTFKSRTFLFLPFVHTYRTLTPSLSSMPRNQRSGANVERRWKLKAKTGAQLSAKGDAAATAEETVTNKLAGLSIGENSGKTGAQGAVWKPKSYGTASGGTVTEVENGTAIEASVASTQKSGGNGLSKIFRGNLLEKFTVDNSTYTRAQVRATFYPKFENEKSDQEVRTRMIELVAKGLATLEVSLKHSGSLFMYAGHEGGAYAKNSFGNIYTAVGVFVLGRMFCEAWGAEASKKQAEFNNFLERNRLCISMELVTAVLGDHGQRPLEDYAVVTAVAELGNGKPKFYSTPEIIAFCRKWRLPTNHVWLFSTRKSAASFFIAYDALCEEGTATSVCKALDEIADISVPDNQYPSEDNSWWFVVFAFVLFQFQSAVFCSKDHVKAQGEILEGLVARLVSHDSSNHIEKTLKEFPPPAADGVALDFGPSLREICAANRSDEKQWDLVKQDIWVPPSLCSGCCQIKALLKSVGSSFCPGYSDWFGTDGADYHSRNVDRSVLSKFLQAHPADYSTKKLQEVVRLMREKRYPAAFKCYHNFHKVDAMSSENIFYKMVIHVHSDSGFQRYQKDMRLKPGLWPLYRGFFVDINLFKANKEMAAEICKNSVNETGNYSSGEDDFANEDANLMVKLKFLTYKLRTFLIRNGLSNLFKEGPGAYKAYYLSQKFHSRGQGSQQHCERDPWDLHAVHGDVEDLLNSYVKLQQMKKWGTSPEKQRELSKMLDEWAVYIRRKCGNKQLSSSTYLSEAEPFLEEFAKRSPQNQVLIGSAGNLVRTEDFMAIVKEGQDEEGDLVAERKIALPGPNISVKDSVPKYEGLIVFFPGIPGCAKSTLCKELLNAEGGLGDDRPVHSLMGDLIKGKYWKNVAEEFRKKPNSIILADKNAPNEEVWKLGKASGIGWSTIGLAKIAESVYERCWPEELDIVKPNFQVPGESMLLQGICSVTFAFDLIEDMCRKTRASAIPVVPESEGTHTNPFSLDALAVFMFRVLQRVNHPGNLDKASPNAGFVLLMFYHLYDGRSRIDFEFELIQRFGSLVKIPLLKSDRTALPGPVQSILKEGINLYRNHALTPGRLDSTKGYYEKEWIKWEKQLRDILCENAEYFNSIQVPFEFAVKQVLEQMRNIVKRDYTPPNTEKRKLGTIVFAALSMPVTEIKGVLNKLADSNPKIDVFLKDKDFENLNRAHLTLAHMRSHGIKAVADYGIHLNKKVPVELRALLFSNKMAAFEACPGSVEGEKVVSKNPWPHITLWTAEGVAPKEANMLPELFAEGKANRIDFNPPIILSGTVGFY 1300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01406 1300 PANTHER TRNA LIGASE 1 99 680 IPR038837 GO:0003972|GO:0006388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01406 - - gmx:100815563 1946.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01406 11 38428192 38454970 Spst11g01406 11 38428192 38454970 ECH