Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01405 ATGGCGTTCAGAGGGAAAGAGATGGTGAAGAAAATTCTAAAGACGGTGGGAGAGAATGGTTTGAGTCGAAGAGAAAAGGAATCGTTGGAGAAATGCATGCCTCGAAGCAAGGTTGTGATGAATCGCGCCAAACGCGGTCTCTTTGCGGGGCGACATATTCAGTTTGGGAATCGTGTCAGTGAAGATGGCGGTAACAAGACAAGGAGAACCTGGAAACCAAATGTCCAGGAAAAGCGGCTCTTCAGTTATATCCTTGATCGTCACGTTCGTGTTAAAGTCACCACCCATGCCATTCGATGCATAGACAAGGCAGGTGGGATTGATGAGTACTTGCTCAAAACTCCTTATCACAAAATGGACACTGAAATGGGTATTCTCTGGAAGGCAAAAATTGAGAAATTGTATGAAGAGCTAGGCAATAAGGAGGTCGTATTCTTTTCACTTGAGGATGAAGCGAAGTTTGAGCAGGACTTCAAAGATTTGAAACTATCTGAAAGGGAAGCACGAAAGGAGATCAGAAGAAAAATGTACACTGGGATGAGCAAGCACAAGCTAATCGAGGTAGAACATAAAGACGATCAATCTATTGTCGAGAAAGGCAATAAGATTGAGGAGGAAATTTCGCATGATTCATCAAAACAGGTGGTTCCTGTCTCGTATGTCTTAGCTGCTGACAAGCTCAAAGTTGGAAGTATTATTTCTAACTGA 708 0.4308 MAFRGKEMVKKILKTVGENGLSRREKESLEKCMPRSKVVMNRAKRGLFAGRHIQFGNRVSEDGGNKTRRTWKPNVQEKRLFSYILDRHVRVKVTTHAIRCIDKAGGIDEYLLKTPYHKMDTEMGILWKAKIEKLYEELGNKEVVFFSLEDEAKFEQDFKDLKLSEREARKEIRRKMYTGMSKHKLIEVEHKDDQSIVEKGNKIEEEISHDSSKQVVPVSYVLAADKLKVGSIISN 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01405 235 Gene3D Ribosomal protein L28/L24 47 118 IPR037147 GO:0003735
Spst11g01405 235 Pfam Ribosomal L28 family 45 104 IPR026569 GO:0003735
Spst11g01405 235 FunFam 54S ribosomal protein L24 47 118 - -
Spst11g01405 235 Hamap 50S ribosomal protein L28 [rpmB]. 42 110 IPR001383 GO:0003735|GO:0005840|GO:0006412
Spst11g01405 235 PANTHER 39S RIBOSOMAL PROTEIN L28, MITOCHONDRIAL 1 192 IPR026569 GO:0003735
Spst11g01405 235 SUPERFAMILY L28p-like 43 119 IPR034704 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01405 K02902 - gmx:102663308 436.032