Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01398 ATGAAGGACATGCTTTTCTGGAAATGTTTGGTAATGAGAGAGATAACGATGATATCATTTTTAGTGCGAAGATCATCCACGGTGGCTACCACCTCCATCCTTATCTCAAACTCTGTTTTCAGAAGCAAACCTCAGCCTCACTCTGCTGCTGCTTTCTCCACCTCCTTGCTCTTCGACGAAACTCAGATACAGTTTAAAGAAAGCGTTGCTCAGTTTGCATCGGAAAATATTGCCCCTCATGCTTCAAAAATAGACCACACAAATTATTTCCCAAAGGAGGTGAACTTATGGAAAAGCATGGGTGAATTTAATCTCCTTGGGATTACTGCACCAGAGGAATATGGAGGGCTTGGTCTAGGTTACTTGTATCACTGTATAGCAATGGAAGAGATTAGCCGTGCTTCGGCATCAGTTGGTCTTTCTTATGGTGCTCATTCAAACTTGTGTGTCAATCAGCTGGTGAGGAATGGAAGCCCTGCCCAGAAAGAGAAATATTTACCAAAGCTTATTTCTGGGGAGCATGTGGGAGCTTTGGCAATGAGTGAGCCCAATTCTGGGTCTGATGTAGTCAGCATGAAATGCAAGGCTGATCGTGTAGATGGGGGCTATTTACTTAATGGGAACAAGATGTGGTGTACTAATGGCCCAGTTGCTCAAACATTAGTTGTCTATGCTAAAACAGACATAACTGCTGGGTCAAAAGGCATTACTGCATTCATCATCGAGAAGGGAATGCCTGGGTAA 744 0.4355 MKDMLFWKCLVMREITMISFLVRRSSTVATTSILISNSVFRSKPQPHSAAAFSTSLLFDETQIQFKESVAQFASENIAPHASKIDHTNYFPKEVNLWKSMGEFNLLGITAPEEYGGLGLGYLYHCIAMEEISRASASVGLSYGAHSNLCVNQLVRNGSPAQKEKYLPKLISGEHVGALAMSEPNSGSDVVSMKCKADRVDGGYLLNGNKMWCTNGPVAQTLVVYAKTDITAGSKGITAFIIEKGMPG 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01398 247 FunFam Isovaleryl-CoA dehydrogenase, mitochondrial 51 174 - -
Spst11g01398 247 PANTHER ACYL-COA DEHYDROGENASE 57 247 - -
Spst11g01398 247 Pfam Acyl-CoA dehydrogenase, N-terminal domain 60 173 IPR013786 GO:0016627|GO:0050660
Spst11g01398 247 ProSitePatterns Acyl-CoA dehydrogenases signature 1. 179 191 IPR006089 GO:0003995
Spst11g01398 247 Pfam Acyl-CoA dehydrogenase, middle domain 177 247 IPR006091 GO:0016627
Spst11g01398 247 Gene3D - 50 174 IPR037069 GO:0016627|GO:0050660
Spst11g01398 247 Gene3D - 176 247 IPR046373 GO:0016627
Spst11g01398 247 SUPERFAMILY Acyl-CoA dehydrogenase NM domain-like 52 247 IPR009100 GO:0016627
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01398 59 247 Acyl Lipid Metabolism Gene Families AT3G45300 85.185 1.86e-110 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01398 K00253 - gmx:100784046 398.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01398 11 38356459 38360597 Spst11g01398 11 38356459 38360597 ECH