Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01392 ATGTTCTTTGATGAATTCAAGTGGGGACATGTTTTATCATATGGAGCTGCCTGCAAGCGTTTCAAAGCTTTTCATTTTTGCGTGTCTGAGTTCAACTGCATGAATCAAATCTCTACTATCTTGCAGACTAGCACTTTCTATTCCATTCCTAAACACATGGACACGGATGCCATTGGAGATCTTGTTGACAAGCTCAAGGCTATCCAGAATGACGATGTAGAAGATCAAGATGAATATGATGATTTTGATGATGATGATGATGAAGAAGAAGAAGAAGAACATGAACCTATCACACTTGGCTTTGTTGACAAGCCTAAGAATAAATGGTCTCTTCAACGTCAATATTTCCCAAGCAAAGCTGGAGGAGTGCCTGCTTGGCTTGACCCTTTGAACATACCATCAGGGGGATCATTTGTGTGTGACATTTGTGGAGACCCTTTACAATTCTTGCTTCAGGTTTATGCGCCAACTGAGAAGGAAACTACATTTCACCGAATGTTGTTTGTTTTCATGTGTCCCTCAATGAAATGTCTTCTCAGGGATCAACATGAGCAATGGAAACACCATCCAGAGAAGCCGTCTAGAAGTGTGAAGGTTTTCCGTTGTCAATTACCTCATGTTAATCCATTTTACTCTCCAGAAAGCCCTCAGTATAATGAGAGTCACGGACCGGCTAGCAGTGGAGCTGTTCTTTGTGATTGGTGTGGCACTTGGAAAGGAGACAAGATCTGTAGTAGTTGCAGACAAGCACGGTATTGCTCTGAGAAACACCAGGTTATGAGTTGGCGCACAGGGCATAAAATTGCTTGCCCTCAGATGAAAGTTTCTTCACTTGTTTCTGAATCCAACAAAATTGGAACCACCTCCCTGGAATCTCATAAAGTTGGAAGCAAGAATTTGTGGCCTGAATTTGAGATCACCATTGAAGATGAAAGTGAATATAATAGAGACATGTGTGAGGAAAATACCTTGTCTAATTCCTTAATCTCAAGGAACAGGAATGATGACTCGTTGAATTCAATTTTGGATAACTTTCAGGGTGATGCTGACAAAAAGAGTTGGGCCTCCTTCCAGGAATGCATTGACAAGGCCCCTGAACAAGTGCTAAGGTATTATAGGAATACTAATGCTAAGCCAATATGGCCTGTTACAAGTGGTCGGCCATCAAATGCTAATATCCCTAGATGTAGTTACTGCAGCGGACCTATGTGTTGTGAATTTCAGATTTTGCCACAGCTGCTTTATTACTTCGGCGTTGACAATGAAGTGGACTCTCTGGATTGGGCTTCAATTGTGGTGTATGCATGTGAAGCCTCTTGCGATGCAAGTTTGCCTTACAAACATGAATTTGTTTGGGTGCAAATTTATTCACCTTCCACAGCCTTATAA 1389 0.4161 MFFDEFKWGHVLSYGAACKRFKAFHFCVSEFNCMNQISTILQTSTFYSIPKHMDTDAIGDLVDKLKAIQNDDVEDQDEYDDFDDDDDEEEEEEHEPITLGFVDKPKNKWSLQRQYFPSKAGGVPAWLDPLNIPSGGSFVCDICGDPLQFLLQVYAPTEKETTFHRMLFVFMCPSMKCLLRDQHEQWKHHPEKPSRSVKVFRCQLPHVNPFYSPESPQYNESHGPASSGAVLCDWCGTWKGDKICSSCRQARYCSEKHQVMSWRTGHKIACPQMKVSSLVSESNKIGTTSLESHKVGSKNLWPEFEITIEDESEYNRDMCEENTLSNSLISRNRNDDSLNSILDNFQGDADKKSWASFQECIDKAPEQVLRYYRNTNAKPIWPVTSGRPSNANIPRCSYCSGPMCCEFQILPQLLYYFGVDNEVDSLDWASIVVYACEASCDASLPYKHEFVWVQIYSPSTAL 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01392 462 MobiDBLite consensus disorder prediction 75 96 - -
Spst11g01392 462 ProSitePatterns Zinc finger MYND-type signature. 232 270 IPR002893 -
Spst11g01392 462 PANTHER PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED 70 458 - -
Spst11g01392 462 ProSiteProfiles Zinc finger MYND-type profile. 232 270 IPR002893 -
Spst11g01392 462 Gene3D - 219 276 - -
Spst11g01392 462 Pfam MYND finger 232 270 IPR002893 -
Spst11g01392 462 Pfam Programmed cell death protein 2, C-terminal putative domain 352 454 IPR007320 GO:0005737
Spst11g01392 462 SUPERFAMILY HIT/MYND zinc finger-like 230 274 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01392 K14801 - gmx:100818325 721.465