Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01389 ATGTCATCAATGCATCAACTGCTCTTTGTAATTACGATTCCTATCATTTGTAATCCTTTCAAATTTCATATAAACCTTCATTTCACAAAGCCAAAAATGATGAAAAAGCACTGTGTCTTGCCTTTCTCACTAGCACTGGTAGTTTCAATTTTGTTTTTCACCACCGCTTTAGCCCAGTTATCACCAGCTGCTTCCCCTCTAAAACCACCCCAAGCTACCCCTACAGCCCCAGCTGCAGCTCCTAAACCATTGGTTCCCTCACTGCCAGAGTCTCCAAGTGATGCCACCCCTGACACTCCAGCTGTTGACATTGTTGGAATCCTGAGGCAGGCCAAGTCATTCAACATCCTTATCCGCCTCATGAAAACCACCCAATTGATCAACCAACTCAATGCTCAACTCCTCACTACTAAATCAGGTGGCATCACCATTCTTGCGCCTGATGACAGTGCCTTCTCTGAACTCAAAGCAGGCTTCCTCAACTCTCTTTCCGATGGACAAAAGCTCGAGCTCTTACAGTTCCATGTTCTTTCAGACTATGTGTCTAGCTCCAACTTCGATACTCTAACCAACCCTGTGAGAACACTTGCAGGGGCTAAACCTGGAAAGGTGGAACTGAATGTGATAAGTTATGGAGGGAGTGTAAATATCTCAACGGGTGAGGTTAACACCACCATCACTGGCATCGTATATACAGATAAGCATCTTGCTATTTACAAGGTGGGGAAGGTGCTTCTTCCTATGGACTTCTTTGCTGTTGCTAAGGCACCAGTAAAGGCACCCTCTTTGGCTCCAGAACCATCTGCAAAAGCTCCCAAAGCGGATAAGGAGAAGTCACTTTCTCCAGATTCCTCAGATTCATCTGAGATTAATTCCACAAACGCGAACTCTGGCACTGTGAAAATCAATATACTTGGAAAGTGGGTGTCTCTTGTTCTTGGACTAGCCCTTGTGACTGCATTGTCTGCGTAA 972 0.4516 MSSMHQLLFVITIPIICNPFKFHINLHFTKPKMMKKHCVLPFSLALVVSILFFTTALAQLSPAASPLKPPQATPTAPAAAPKPLVPSLPESPSDATPDTPAVDIVGILRQAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDSAFSELKAGFLNSLSDGQKLELLQFHVLSDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTITGIVYTDKHLAIYKVGKVLLPMDFFAVAKAPVKAPSLAPEPSAKAPKADKEKSLSPDSSDSSEINSTNANSGTVKINILGKWVSLVLGLALVTALSA 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01389 323 SMART fasc_3 143 248 IPR000782 -
Spst11g01389 323 MobiDBLite consensus disorder prediction 262 293 - -
Spst11g01389 323 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 41 302 IPR045003 -
Spst11g01389 323 FunFam Fasciclin-like arabinogalactan protein 11 87 247 - -
Spst11g01389 323 ProSiteProfiles FAS1/BIgH3 domain profile. 101 245 IPR000782 -
Spst11g01389 323 MobiDBLite consensus disorder prediction 67 90 - -
Spst11g01389 323 MobiDBLite consensus disorder prediction 64 96 - -
Spst11g01389 323 Gene3D FAS1 domain 87 247 IPR036378 -
Spst11g01389 323 Pfam Fasciclin domain 113 247 IPR000782 -
Spst11g01389 323 SUPERFAMILY FAS1 domain 96 248 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01389 Spst-Chr11 38284337 38285308 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01389 - - gmx:100790242 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01389 11 38284337 38285308 Spst11g01389 11 38284337 38285308 ECH