Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01388 ATGGTTTTGCCTTATGGTTTTGCTGTGGAGATACCATTTAAGATCAAACTCAAACTTGGCGACAGAGGTTATGAACTTCTAGAGATACTAGACTATTTGCCAATAAATGAAACAGTTAAGGACTCTGTGTGGCTTGACTTAAGCAGCTGGAAGATGAAGCAAGCAACATTTTTCCTTTTGTCACTCTTCCTACTTCTTTCCTCCACCACCTTGGCAATTTCTCCTGCCCCTGCAGCAGCCCCAAAAGCCCCAGCAAAACTTCCCCCCACCCCAAAGGCCACAGCACCATCACCAAAACCATTAGTCCCCACATTACCTCAATCTCCGGACTCCCCTGACTCTGTCCCAGATGACATCACCAGAATCCTCAAAAAGGCCAAAACGTTCTCAACCATAATCCGCCTCCTCAAAACTACTGAAATCATGAACAACATCAACTCACAGCTCATAACAGCAAAGAGTGGAGGCATAACCATTCTTGCACCAGATGATTCTGCTTTTTCCAACCTCAAAGCAGGCTTCCTGAACTCCCTAAACGAAGGCCAGAAAATAGAACTTGTGCAGTTTCACATATTGCCAGAGTTTGTGTCCAGCTCAAACTTTGACTCTCTAAGCAACCCTGTGCAGACAGTGGCTGGTAAAGACCCTGCAAGGCTTCCACTGAATGTGAATGCATTAGGTAACACAGTCAACATTTCAACTGGGGTGGTCAATGCCACCATTCTTGGGGTAGTATACTCGGATAACAAACTTGGGATTTATCACGTGGACAAGGTGCTTCTTCCTCTAGATTTCTTTGTAACCAATAAGGCTCCAGCTTTGGCTCCTTCATCTCTTGCAAAGGCTCCCAAAGCTGCTAAGGACAACTCTTCTGAGGACGATCAAGACGAAACAAATCAGGCTCAGAATAAATCAGGGGCAGTGAATTTGGTTCGCATTGGTGGAACAAAATCAATGTTAATGGGGGTAGCTTTGATCGCAGTGGCAACCATGTGGAGTTGA 1002 0.4531 MVLPYGFAVEIPFKIKLKLGDRGYELLEILDYLPINETVKDSVWLDLSSWKMKQATFFLLSLFLLLSSTTLAISPAPAAAPKAPAKLPPTPKATAPSPKPLVPTLPQSPDSPDSVPDDITRILKKAKTFSTIIRLLKTTEIMNNINSQLITAKSGGITILAPDDSAFSNLKAGFLNSLNEGQKIELVQFHILPEFVSSSNFDSLSNPVQTVAGKDPARLPLNVNALGNTVNISTGVVNATILGVVYSDNKLGIYHVDKVLLPLDFFVTNKAPALAPSSLAKAPKAAKDNSSEDDQDETNQAQNKSGAVNLVRIGGTKSMLMGVALIAVATMWS 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01388 333 Pfam Fasciclin domain 128 262 IPR000782 -
Spst11g01388 333 Gene3D FAS1 domain 104 262 IPR036378 -
Spst11g01388 333 MobiDBLite consensus disorder prediction 278 303 - -
Spst11g01388 333 ProSiteProfiles FAS1/BIgH3 domain profile. 116 260 IPR000782 -
Spst11g01388 333 FunFam Fasciclin-like arabinogalactan protein 11 104 262 - -
Spst11g01388 333 MobiDBLite consensus disorder prediction 81 110 - -
Spst11g01388 333 SUPERFAMILY FAS1 domain 95 263 IPR036378 -
Spst11g01388 333 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 56 311 IPR045003 -
Spst11g01388 333 SMART fasc_3 158 263 IPR000782 -
Spst11g01388 333 MobiDBLite consensus disorder prediction 79 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01388 Spst-Chr11 38281003 38282867 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01388 - - gmx:102665444 426.017