Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01387 ATGAAACAGAAATGTGTCTTGTTCTTCTCACTAGCACTGCTACTTCCATTCTTGTATTCCACCACCACTTTAGCCCAATTATCACCAGCTGCTGCCCCTCCAAAACCACCCCAACCTACCCTTACAACACCAGCTGCAGCTCCTAAACCTTTGGTTCCCTCATTGCCACAGTCACCAAGTGATTCCACCCCTGACACTGCAGCTGTTGACATTGTTGGAATCCTGAGGCAGGCCAAGTCATTCAACATCTTAATCCGCCTCATGAAAACCACCCAATTGATCAACCAACTCAATGCACAACTCCTCACTACTAAATCAGGTGGCATCACCATTCTTGCACCTGATGACAGTGCCTTCTCTGAACTCAAAGCAGGCTTCCTCAATTCTCTTTCTGATGGCGAAAAGCTTGAGCTCTTACAGTTCCACGTTCTTTCAGACTATGTGTCTAGCTCCAACTTTGATACTCTAACCAATCCAGTGAGAACCCTTGCAGGGGCTAAACCTGGAAAGGTGGAACTGAATGTGATAAGTTACGGAGGGAGTGTGAACATCTCAACAGGTGAGGTTAACACCACCATCACTGGCATTGTATATACAGATAAGCATCTTGCTATTTACAAGGTGGGGAAGGTGCTTCTTCCTATGGACTTTTTTGTTGTTGCTAAAACACCTGCAAAGGCACCTTCTTTGGCACCAGAATCTTCGGCAGAGACGCCTAAAGCTGATAAGGAGAAGTCACTGTCCCCAGATTCCTCGGAATCATCTGAGATTAATACCAGAAACGATACCTCTGGCATTGTGAAAATCAATAATGGAAAGTGGTTGTCACTGGTCCTTGGACTAGTTCTCCTAGTTGCATTGTCATCATAA 870 0.454 MKQKCVLFFSLALLLPFLYSTTTLAQLSPAAAPPKPPQPTLTTPAAAPKPLVPSLPQSPSDSTPDTAAVDIVGILRQAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDSAFSELKAGFLNSLSDGEKLELLQFHVLSDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTITGIVYTDKHLAIYKVGKVLLPMDFFVVAKTPAKAPSLAPESSAETPKADKEKSLSPDSSESSEINTRNDTSGIVKINNGKWLSLVLGLVLLVALSS 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01387 289 Pfam Fasciclin domain 80 214 IPR000782 -
Spst11g01387 289 SMART fasc_3 110 215 IPR000782 -
Spst11g01387 289 Gene3D FAS1 domain 53 214 IPR036378 -
Spst11g01387 289 MobiDBLite consensus disorder prediction 30 57 - -
Spst11g01387 289 SUPERFAMILY FAS1 domain 63 215 IPR036378 -
Spst11g01387 289 ProSiteProfiles FAS1/BIgH3 domain profile. 68 212 IPR000782 -
Spst11g01387 289 MobiDBLite consensus disorder prediction 229 260 - -
Spst11g01387 289 FunFam Fasciclin-like arabinogalactan protein 11 54 214 - -
Spst11g01387 289 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7 265 IPR045003 -
Spst11g01387 289 MobiDBLite consensus disorder prediction 28 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01387 Spst-Chr11 38278613 38279482 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01387 - - gmx:100790242 403.29