Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01383 ATGATGAAAAAGCAATTTGGTTTTTCCTTCTCATTAGCTCTGCTAGTTTCATTTTTTTATTCCACCACCACCTTAGCCCAACTATCGCCAACTTCTGCCCCTCTAAAACCACCCCAACCTACTCCTACCCCACCAGCTGAAGCTCCTAAACAACCATTGGTTCCCTCATTGCCACAGTCACCAAGTGATGCCACTCCTGACACTGCAGCTGTTGACATTGTTGGAATCCTGAGGCAGGCAAAATCATTCAACATCCTTATCCGACTCATGAAAACCACCCAATTGATCAACCAACTCAATGCACAGCTTCTCACAACTAAATCAGGTGGCATCACCATTCTTGCACCTGATGACAGTGCCTTTTCTGAACTCAAAGCAGGCTTCCTCAACTCTCTTTCTGATGGACAAAAGCTCGAGCTGTTACAGTTCCATGTTCTTTCAGACTATGTGTCCAGCTCCAACTTTGATACTCTCACCAACCCTGTGAGAACCCTTGCAGGGGCGAAACCTGGAAAGGTTGAATTGAATGTGATAAGTTACGGAGGGACTGTGAACATCTCAACAGGTGAGGTTAACACCACCATAGCTGGCATTGTATATACGGATAAACATCTTGCTATTTACAAGGTGGGGAAGGTGCTTCTTCCCATGGACTTCTTTACAGTGGCCAAGGCACCAGCAAAGGGACCCTCTTTGGCCCCAGAACCTTCAGCAAAGGCTCCTAAAGCGGATAAGGAAAAGCCACTGTCTCCAGATTCCTCCGAATCATCTGAGATTAATTCCACAACCGAGAACTCTGGCACTGTGAAAATCAATGTGCAAGGAAAGTGGGTGTCCCTTTTTCTTGGAGTACTTATTGTGCTTACATTGTCATCGTAA 879 0.4573 MMKKQFGFSFSLALLVSFFYSTTTLAQLSPTSAPLKPPQPTPTPPAEAPKQPLVPSLPQSPSDATPDTAAVDIVGILRQAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDSAFSELKAGFLNSLSDGQKLELLQFHVLSDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGTVNISTGEVNTTIAGIVYTDKHLAIYKVGKVLLPMDFFTVAKAPAKGPSLAPEPSAKAPKADKEKPLSPDSSESSEINSTTENSGTVKINVQGKWVSLFLGVLIVLTLSS 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01383 292 Gene3D FAS1 domain 55 216 IPR036378 -
Spst11g01383 292 MobiDBLite consensus disorder prediction 228 265 - -
Spst11g01383 292 SUPERFAMILY FAS1 domain 67 217 IPR036378 -
Spst11g01383 292 ProSiteProfiles FAS1/BIgH3 domain profile. 70 214 IPR000782 -
Spst11g01383 292 Pfam Fasciclin domain 82 216 IPR000782 -
Spst11g01383 292 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 9 270 IPR045003 -
Spst11g01383 292 MobiDBLite consensus disorder prediction 33 56 - -
Spst11g01383 292 FunFam Fasciclin-like arabinogalactan protein 11 56 216 - -
Spst11g01383 292 SMART fasc_3 112 217 IPR000782 -
Spst11g01383 292 MobiDBLite consensus disorder prediction 30 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01383 Spst-Chr11 38247491 38248369 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01383 - - gmx:100776667 426.402